RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 KIAA1755Q5JYT7 1200 aa18.89■□□□□ 0.61
LRRC28-202ENST00000331450 GPAT2Q6NUI2 795 aa18.89■□□□□ 0.61
LRRC28-202ENST00000331450 USP17L2Q6R6M4 530 aa18.89■□□□□ 0.61
LRRC28-202ENST00000331450 DGKHQ86XP1 1220 aa18.89■□□□□ 0.61
LRRC28-202ENST00000331450 VCPKMTQ9H867 229 aa18.89■□□□□ 0.61
LRRC28-202ENST00000331450 STX8Q9UNK0 236 aa18.89■□□□□ 0.61
LRRC28-202ENST00000331450 PRC1O43663 620 aa18.88■□□□□ 0.61
LRRC28-202ENST00000331450 MCM5P33992 734 aa18.88■□□□□ 0.61
LRRC28-202ENST00000331450 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
LRRC28-202ENST00000331450 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
LRRC28-202ENST00000331450 ZYXQ15942 572 aaKnown RBP18.88■□□□□ 0.61
LRRC28-202ENST00000331450 FASTKD5Q7L8L6 764 aaKnown RBP18.88■□□□□ 0.61
LRRC28-202ENST00000331450 LRRC47Q8N1G4 583 aaKnown RBP18.88■□□□□ 0.61
LRRC28-202ENST00000331450 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
LRRC28-202ENST00000331450 JAKMIP1Q96N16 626 aaKnown RBP18.88■□□□□ 0.61
LRRC28-202ENST00000331450 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
LRRC28-202ENST00000331450 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 HMGB1P09429 215 aaKnown RBP18.87■□□□□ 0.61
LRRC28-202ENST00000331450 TOP1P11387 765 aaKnown RBP18.87■□□□□ 0.61
LRRC28-202ENST00000331450 VCAM1P19320 739 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 TREML2Q5T2D2 321 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 GADL1Q6ZQY3 521 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 CHST3Q7LGC8 479 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 ANKRD23Q86SG2 305 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 IFNL1Q8IU54 200 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 FAM43AQ8N2R8 423 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 IGDCC4Q8TDY8 1250 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 LPAR1Q92633 364 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 TMEM47Q9BQJ4 181 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
LRRC28-202ENST00000331450 AGTPBP1Q9UPW5 1226 aa18.87■□□□□ 0.61
LRRC28-202ENST00000331450 COL11A1P12107 1806 aaPredicted RBP18.86■□□□□ 0.61
LRRC28-202ENST00000331450 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
LRRC28-202ENST00000331450 DHX32Q7L7V1 743 aaKnown RBP18.86■□□□□ 0.61
LRRC28-202ENST00000331450 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
LRRC28-202ENST00000331450 TMEM87BQ96K49 555 aa18.86■□□□□ 0.61
LRRC28-202ENST00000331450 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
LRRC28-202ENST00000331450 GOPCQ9HD26 462 aa18.86■□□□□ 0.61
LRRC28-202ENST00000331450 TMOD4Q9NZQ9 345 aa18.86■□□□□ 0.61
LRRC28-202ENST00000331450 SLC45A1Q9Y2W3 748 aa18.86■□□□□ 0.61
LRRC28-202ENST00000331450 F5H6K3 240 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 SH2B2O14492 632 aaPredicted RBP18.85■□□□□ 0.61
LRRC28-202ENST00000331450 IFIT3O14879 490 aaKnown RBP18.85■□□□□ 0.61
LRRC28-202ENST00000331450 NDUFB10O96000 172 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 CPA1P15085 419 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 CASTP20810 708 aaKnown RBP18.85■□□□□ 0.61
LRRC28-202ENST00000331450 PSMA5P28066 241 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 KLRC3Q07444 240 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 BLOC1S2Q6QNY1 142 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 SENP2Q9HC62 589 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 CEP350Q5VT06 3117 aa18.85■□□□□ 0.61
LRRC28-202ENST00000331450 WDR46O15213 610 aaKnown RBP18.84■□□□□ 0.61
LRRC28-202ENST00000331450 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
LRRC28-202ENST00000331450 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
LRRC28-202ENST00000331450 WTAPQ15007 396 aa18.84■□□□□ 0.61
LRRC28-202ENST00000331450 SART3Q15020 963 aaKnown RBP18.84■□□□□ 0.61
LRRC28-202ENST00000331450 TMEM67Q5HYA8 995 aa18.84■□□□□ 0.61
LRRC28-202ENST00000331450 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
LRRC28-202ENST00000331450 GMCL1Q96IK5 515 aa18.84■□□□□ 0.61
LRRC28-202ENST00000331450 C22orf23Q9BZE7 217 aa18.84■□□□□ 0.61
LRRC28-202ENST00000331450 GPHNQ9NQX3 736 aaPredicted RBP18.84■□□□□ 0.61
LRRC28-202ENST00000331450 ERICH2A1L162 156 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 PDHXO00330 501 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 SNHG28P0DPA3 235 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 LIFRP42702 1097 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 RUFY3Q7L099 469 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 SPICE1Q8N0Z3 855 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 FBXL16Q8N461 479 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 PNMA1Q8ND90 353 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 TCEANC2Q96MN5 208 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 KIF2CQ99661 725 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.6
LRRC28-202ENST00000331450 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.6
LRRC28-202ENST00000331450 ADGRA2Q96PE1 1338 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 MAP2K1Q02750 393 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-202ENST00000331450 SLFN13Q68D06 897 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 SGMS1Q86VZ5 419 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 TBC1D32Q96NH3 1257 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 CFHR5Q9BXR6 569 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 RPAP3Q9H6T3 665 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-202ENST00000331450 KAT14Q9H8E8 782 aa18.82■□□□□ 0.6
LRRC28-202ENST00000331450 ALDH1A1P00352 501 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 PDHBP11177 359 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
LRRC28-202ENST00000331450 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 OTUD7BQ6GQQ9 843 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 DCAF4Q8WV16 495 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 NUP88Q99567 741 aaPredicted RBP18.81■□□□□ 0.6
LRRC28-202ENST00000331450 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
LRRC28-202ENST00000331450 WBP1LQ9NX94 342 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 CYP46A1Q9Y6A2 500 aa18.81■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L15C9J2P7 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L13C9JLJ4 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L11C9JVI0 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L18D6R9N7 530 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms