RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 RNF225M0QZC1 329 aaPredicted RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 N4BP3O15049 544 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 IRAK1P51617 712 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 ITIH3Q06033 890 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 PPFIA1Q13136 1202 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 CCDC57Q2TAC2 916 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 MMS19Q96T76 1030 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 MYH8P13535 1937 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 DISP2A7MBM2 1401 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 KRT9P35527 623 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 GGCXP38435 758 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 STX17P56962 302 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
GINS3-202ENST00000328514 KLHL10Q6JEL2 608 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
GINS3-202ENST00000328514 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 AENQ8WTP8 325 aaKnown RBP12.69□□□□□ -0.38
GINS3-202ENST00000328514 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
GINS3-202ENST00000328514 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
GINS3-202ENST00000328514 SH3GL2Q99962 352 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 CRACR2AQ9BSW2 395 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 ZSWIM5Q9P217 1185 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 KCNJ14Q9UNX9 436 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
GINS3-202ENST00000328514 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 TRIM75PA6NK02 468 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 EBAG9O00559 213 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 ERLIN2O94905 339 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 EPB41P11171 864 aaKnown RBP12.68□□□□□ -0.38
GINS3-202ENST00000328514 MCAMP43121 646 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
GINS3-202ENST00000328514 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 RTN1Q16799 776 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 OR8K1Q8NGG5 319 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 STRBPQ96SI9 672 aaKnown RBP12.68□□□□□ -0.38
GINS3-202ENST00000328514 PYM1Q9BRP8 204 aaKnown RBP12.68□□□□□ -0.38
GINS3-202ENST00000328514 ISCA1Q9BUE6 129 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 SELENOOQ9BVL4 669 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 KRT23Q9C075 422 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 KAT14Q9H8E8 782 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 GOLGA6CA6NDK9 693 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 IFIT3O14879 490 aaKnown RBP12.68□□□□□ -0.38
GINS3-202ENST00000328514 CSF1RP07333 972 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 GOLGA6DP0CG33 693 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
GINS3-202ENST00000328514 KRT83P78385 493 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 NR5A1Q13285 461 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 MEA1Q16626 185 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 TTLL7Q6ZT98 887 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 RPAINQ86UA6 219 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 GOLGA6AQ9NYA3 693 aa12.68□□□□□ -0.38
GINS3-202ENST00000328514 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 EIF3HO15372 352 aaKnown RBP eCLIP12.67□□□□□ -0.38
GINS3-202ENST00000328514 CYP27B1O15528 508 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
GINS3-202ENST00000328514 USP8P40818 1118 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 MMP14P50281 582 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 SKOR1P84550 965 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 E2F4Q16254 413 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 SYMPKQ92797 1274 aaKnown RBP12.67□□□□□ -0.38
GINS3-202ENST00000328514 EPSTI1Q96J88 318 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
GINS3-202ENST00000328514 CHP1Q99653 195 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 CAPN11Q9UMQ6 739 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 FAM169AQ9Y6X4 670 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 GRIN2DO15399 1336 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 UBR2Q8IWV8 1755 aa12.67□□□□□ -0.38
GINS3-202ENST00000328514 GOLGA6BA6NDN3 693 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 KCNJ18B7U540 433 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 PATL2C9JE40 543 aaKnown RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 CLSTN1O94985 981 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 AFMP43652 599 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 HERVK_113P62684 666 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 PAK1Q13153 545 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 KCNJ12Q14500 433 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 SPATS2Q86XZ4 545 aaKnown RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms