RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZNF652Q9Y2D9 606 aa14.57□□□□□ -0.08
HMGCS1-201ENST00000325110 ERVV-1B6SEH8 477 aa14.57□□□□□ -0.08
HMGCS1-201ENST00000325110 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
HMGCS1-201ENST00000325110 PLA2G4AP47712 749 aa14.57□□□□□ -0.08
HMGCS1-201ENST00000325110 CCDC178Q5BJE1 867 aa14.57□□□□□ -0.08
HMGCS1-201ENST00000325110 GPR161Q8N6U8 529 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-201ENST00000325110 TRIM49BA6NDI0 452 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 PP2D1A8MPX8 630 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 ENC1O14682 589 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 VEGFAP15692 232 aaPredicted RBP14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 FERMT2Q96AC1 680 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 CPVLQ9H3G5 476 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 PRDX5P30044 214 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 VPS18Q9P253 973 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 ADGRG1Q9Y653 693 aa14.56□□□□□ -0.08
HMGCS1-201ENST00000325110 GOLGA8HP0CJ92 632 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 NR1I3Q14994 352 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 KRT31Q15323 416 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 CC2D1AQ6P1N0 951 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 TMEM139Q8IV31 216 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 MED15Q96RN5 788 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 MRFAP1Q9Y605 127 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 CTAGE15A4D2H0 777 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 MYO1BO43795 1136 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 CTAGE8P0CG41 777 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 ZNF18P17022 549 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 PARP10Q53GL7 1025 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 CTAGE6Q86UF2 777 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 CTAGE4Q8IX94 777 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 RBM28Q9NW13 759 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 TFR2Q9UP52 801 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 MFAP3LO75121 409 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 ERLIN1O75477 346 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 BMP15O95972 392 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 SCG2P13521 617 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 TRIM21P19474 475 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 KLRK1P26718 216 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 TFAP4Q01664 338 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 STIM1Q13586 685 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 KCNJ12Q14500 433 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 ANKIB1Q9P2G1 1089 aa14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 PHRF1Q9P1Y6 1649 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-201ENST00000325110 DNA2P51530 1060 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 LONRF2Q1L5Z9 754 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 AMOTL1Q8IY63 956 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 CELF1Q92879 486 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 GSDMAQ96QA5 445 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 UIMC1Q96RL1 719 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 KCPQ6ZWJ8 1503 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 KIF1AQ12756 1690 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 A0A1B0GTH6 734 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 USP17L8P0C7I0 530 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 MAP3K9P80192 1104 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 INF2Q27J81 1249 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 SUGCTQ9HAC7 445 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 TRPM3Q9HCF6 1732 aaPredicted RBP14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 PNPLA7Q6ZV29 1317 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 MARCH6O60337 910 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 CALM1P0DP23 149 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 CALM2P0DP24 149 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 CALM3P0DP25 149 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 KIF5BP33176 963 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 MTIF2P46199 727 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 COPB1P53618 953 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 ST5P78524 1137 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 PKN1Q16512 942 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 DYNLL2Q96FJ2 89 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 CALCOCO1Q9P1Z2 691 aa14.54□□□□□ -0.08
HMGCS1-201ENST00000325110 ABCC6O95255 1503 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 NCAPH2Q6IBW4 605 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 DTHD1Q6ZMT9 781 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 TRIM34Q9BYJ4 488 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 SASH3O75995 380 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 ABL1P00519 1130 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 NAP1L1P55209 391 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 DPYDQ12882 1025 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 CTR9Q6PD62 1173 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 NBPF5PQ86XG9 351 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 NAPGQ99747 312 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 PHF20Q9BVI0 1012 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 KCND1Q9NSA2 647 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 ZNHIT6Q9NWK9 470 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 TRIM10Q9UDY6 481 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 ADD3Q9UEY8 706 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 FAM237AA0A1B0GTK4 181 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 RPN1P04843 607 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 GYPCP04921 128 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 SARSP49591 514 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 MECOMQ03112 1051 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 TBX2Q13207 712 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 SEC23AQ15436 765 aa14.53□□□□□ -0.08
HMGCS1-201ENST00000325110 LETM2Q2VYF4 491 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms