RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 WDR78Q5VTH9 848 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 POTEEQ6S8J3 1075 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 UBE2Q1Q7Z7E8 422 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 VCPKMTQ9H867 229 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 MKNK2Q9HBH9 465 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 ZNF287Q9HBT7 754 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 IVNS1ABPQ9Y6Y0 642 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 GPAA1O43292 621 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 ZKSCAN1P17029 563 aaPredicted RBP21.25■□□□□ 0.99
TPM1-203ENST00000317516 SIAH1Q8IUQ4 282 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 MB21D1Q8N884 522 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 PI4K2BQ8TCG2 481 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 TRIB2Q92519 343 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 USP6NLQ92738 828 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 NACAP1Q9BZK3 213 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 CRISPLD2Q9H0B8 497 aa21.25■□□□□ 0.99
TPM1-203ENST00000317516 SLC15A5A6NIM6 579 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 MINDY4BA8MYZ0 360 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 PATL2C9JE40 543 aaKnown RBP21.24■□□□□ 0.99
TPM1-203ENST00000317516 TDO2P48775 406 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 ATP2B2Q01814 1243 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 MAP2K5Q13163 448 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 HDAC1Q13547 482 aaPredicted RBP21.24■□□□□ 0.99
TPM1-203ENST00000317516 APBA2Q99767 749 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 BTBD7Q9P203 1132 aa21.24■□□□□ 0.99
TPM1-203ENST00000317516 SMIM22K7EJ46 135 aa21.23■□□□□ 0.99
TPM1-203ENST00000317516 WDR46O15213 610 aaKnown RBP21.23■□□□□ 0.99
TPM1-203ENST00000317516 EEF2P13639 858 aaKnown RBP21.23■□□□□ 0.99
TPM1-203ENST00000317516 PTPREP23469 700 aa21.23■□□□□ 0.99
TPM1-203ENST00000317516 ANKLE1Q8NAG6 615 aa21.23■□□□□ 0.99
TPM1-203ENST00000317516 GOPCQ9HD26 462 aa21.23■□□□□ 0.99
TPM1-203ENST00000317516 NR2E3Q9Y5X4 410 aa21.23■□□□□ 0.99
TPM1-203ENST00000317516 NAV1Q8NEY1 1877 aa21.23■□□□□ 0.99
TPM1-203ENST00000317516 DDX60LQ5H9U9 1706 aaKnown RBP21.23■□□□□ 0.99
TPM1-203ENST00000317516 MKI67P46013 3256 aaKnown RBP21.22■□□□□ 0.99
TPM1-203ENST00000317516 STRNO43815 780 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 FLOT1O75955 427 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 PRKAR2AP13861 404 aaKnown RBP21.22■□□□□ 0.99
TPM1-203ENST00000317516 DSG3P32926 999 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 TRIM32Q13049 653 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 MAP3K21Q5TCX8 1036 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 SPICE1Q8N0Z3 855 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 OTUD7AQ8TE49 926 aaPredicted RBP21.22■□□□□ 0.99
TPM1-203ENST00000317516 BRCA2P51587 3418 aa21.22■□□□□ 0.99
TPM1-203ENST00000317516 MFSD14CQ5VZR4 134 aa21.21■□□□□ 0.99
TPM1-203ENST00000317516 NECAB2Q7Z6G3 386 aa21.21■□□□□ 0.99
TPM1-203ENST00000317516 CLEC10AQ8IUN9 316 aa21.21■□□□□ 0.99
TPM1-203ENST00000317516 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
TPM1-203ENST00000317516 SPATC1LQ9H0A9 340 aa21.21■□□□□ 0.99
TPM1-203ENST00000317516 H0YGN5 161 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 M0R2C6 588 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 SLC3A2P08195 630 aaKnown RBP21.2■□□□□ 0.98
TPM1-203ENST00000317516 KIAA1755Q5JYT7 1200 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 IFNL3Q8IZI9 196 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 STK11IPQ8N1F8 1099 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 SHCBP1Q8NEM2 672 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 DOCK3Q8IZD9 2030 aa21.2■□□□□ 0.98
TPM1-203ENST00000317516 RAD21O60216 631 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 RASA1P20936 1047 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 CACNB2Q08289 660 aaPredicted RBP21.19■□□□□ 0.98
TPM1-203ENST00000317516 GRB14Q14449 540 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 HABP4Q5JVS0 413 aaKnown RBP21.19■□□□□ 0.98
TPM1-203ENST00000317516 ZMYM1Q5SVZ6 1142 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 DPP9Q86TI2 863 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 PAWRQ96IZ0 340 aaKnown RBP21.19■□□□□ 0.98
TPM1-203ENST00000317516 MOV10L1Q9BXT6 1211 aaKnown RBP21.19■□□□□ 0.98
TPM1-203ENST00000317516 RWDD1Q9H446 243 aaPredicted RBP21.19■□□□□ 0.98
TPM1-203ENST00000317516 MROH8Q9H579 483 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 SLC5A4Q9NY91 659 aa21.19■□□□□ 0.98
TPM1-203ENST00000317516 HOXC6P09630 235 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 PLS1Q14651 629 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 CCL14Q16627 93 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 SAMD1Q6SPF0 538 aaPredicted RBP21.18■□□□□ 0.98
TPM1-203ENST00000317516 EVI5LQ96CN4 794 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 NAPBQ9H115 298 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 EPB41L4AQ9HCS5 686 aaPredicted RBP21.18■□□□□ 0.98
TPM1-203ENST00000317516 NYAP2Q9P242 653 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 STAP2Q9UGK3 403 aa21.18■□□□□ 0.98
TPM1-203ENST00000317516 EVI5O60447 810 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 ERCC3P19447 782 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 PDE4BQ07343 736 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 ATG4CQ96DT6 458 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 SEC62Q99442 399 aaKnown RBP21.17■□□□□ 0.98
TPM1-203ENST00000317516 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.17■□□□□ 0.98
TPM1-203ENST00000317516 NBPF3Q9H094 633 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 OGDHLQ9ULD0 1010 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 ROBO3Q96MS0 1386 aa21.17■□□□□ 0.98
TPM1-203ENST00000317516 SALL3Q9BXA9 1300 aa21.16■□□□□ 0.98
TPM1-203ENST00000317516 SLC25A27O95847 323 aa21.16■□□□□ 0.98
TPM1-203ENST00000317516 PDE1AP54750 535 aa21.16■□□□□ 0.98
TPM1-203ENST00000317516 NCAPG2Q86XI2 1143 aa21.16■□□□□ 0.98
TPM1-203ENST00000317516 TICAM2Q86XR7 235 aa21.16■□□□□ 0.98
TPM1-203ENST00000317516 ADORA2AP29274 412 aa21.15■□□□□ 0.98
TPM1-203ENST00000317516 ABRAQ8N0Z2 381 aa21.15■□□□□ 0.98
TPM1-203ENST00000317516 CLIP2Q9UDT6 1046 aa21.15■□□□□ 0.98
TPM1-203ENST00000317516 ADAMTS5Q9UNA0 930 aa21.15■□□□□ 0.98
TPM1-203ENST00000317516 F5H6K3 240 aa21.14■□□□□ 0.97
TPM1-203ENST00000317516 KLRC3Q07444 240 aa21.14■□□□□ 0.97
TPM1-203ENST00000317516 FAM83BQ5T0W9 1011 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms