RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 XBP1P17861 261 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 PTPREP23469 700 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 SYKP43405 635 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 NOVP48745 357 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 GABPAQ06546 454 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 APOBEC3HQ6NTF7 200 aaKnown RBP7.53□□□□□ -1.2
USP47-201ENST00000305481 STX8Q9UNK0 236 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 ZKSCAN5Q9Y2L8 839 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 PCDHAC2Q9Y5I4 1007 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 ATP2B1P20020 1258 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 KIF5BP33176 963 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 PICALMQ13492 652 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 LONRF3Q496Y0 759 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 CDC42EP5Q6NZY7 148 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 DHX40Q8IX18 779 aaKnown RBP7.53□□□□□ -1.2
USP47-201ENST00000305481 TIGD1Q96MW7 591 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 ZNF219Q9P2Y4 722 aaPredicted RBP7.53□□□□□ -1.2
USP47-201ENST00000305481 SCN9AQ15858 1988 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 PALM3A6NDB9 673 aaPredicted RBP7.52□□□□□ -1.21
USP47-201ENST00000305481 CAVIN2O95810 425 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 DPCR1Q3MIW9 517 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 CCDC178Q5BJE1 867 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 TYW1BQ6NUM6 668 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 HHIPL2Q6UWX4 724 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 CEP95Q96GE4 821 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 ZNF287Q9HBT7 754 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 KCNH3Q9ULD8 1083 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 GOLGA8HP0CJ92 632 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 USP49Q70CQ1 688 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 FOXP4Q8IVH2 680 aaPredicted RBP7.52□□□□□ -1.21
USP47-201ENST00000305481 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.21
USP47-201ENST00000305481 ZNF830Q96NB3 372 aaPredicted RBP7.52□□□□□ -1.21
USP47-201ENST00000305481 ANO10Q9NW15 660 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 MTMR7Q9Y216 660 aa7.52□□□□□ -1.21
USP47-201ENST00000305481 SRPRBQ9Y5M8 271 aaKnown RBP7.52□□□□□ -1.21
USP47-201ENST00000305481 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP47-201ENST00000305481 ZNF646O15015 1829 aaPredicted RBP7.52□□□□□ -1.21
USP47-201ENST00000305481 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
USP47-201ENST00000305481 NFIAQ12857 509 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 METTL16Q86W50 562 aaKnown RBP7.51□□□□□ -1.21
USP47-201ENST00000305481 PLA2G4DQ86XP0 818 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 TMX4Q9H1E5 349 aaPredicted RBP7.51□□□□□ -1.21
USP47-201ENST00000305481 CPVLQ9H3G5 476 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 TRIM75PA6NK02 468 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 PTMAP06454 111 aaKnown RBP7.51□□□□□ -1.21
USP47-201ENST00000305481 DACT2Q5SW24 774 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 ZFPM1Q8IX07 1006 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 ZNF579Q8NAF0 562 aaKnown RBP7.51□□□□□ -1.21
USP47-201ENST00000305481 CSRNP2Q9H175 543 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 TUBE1Q9UJT0 475 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 MORC2Q9Y6X9 1032 aaPredicted RBP7.51□□□□□ -1.21
USP47-201ENST00000305481 G3V3G9 751 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 M0R2N6 131 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 BIN1O00499 593 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 FOXN1O15353 648 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 ECE2O60344 883 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 CRKP46108 304 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 NLRP5P59047 1200 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 PNOCQ13519 176 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 DCAF8Q5TAQ9 597 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 STRIP1Q5VSL9 837 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 KRBA2Q6ZNG9 492 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 KIAA0825Q8IV33 1275 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 TEKT1Q969V4 418 aa7.51□□□□□ -1.21
USP47-201ENST00000305481 IGKV6D-41A0A0C4DH26 115 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 KLRF2D3W0D1 207 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 ZNF500O60304 480 aaPredicted RBP7.5□□□□□ -1.21
USP47-201ENST00000305481 AKR1B1P15121 316 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 MSNP26038 577 aaKnown RBP7.5□□□□□ -1.21
USP47-201ENST00000305481 ZNF75DP51815 510 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 ZNF174Q15697 407 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 AOC3Q16853 763 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 USP17L2Q6R6M4 530 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 PIK3AP1Q6ZUJ8 805 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 CLEC10AQ8IUN9 316 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 TTC12Q9H892 705 aaPredicted RBP7.5□□□□□ -1.21
USP47-201ENST00000305481 STK32BQ9NY57 414 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 PLIN4Q96Q06 1357 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 A0A087X0B3 334 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 TOP1P11387 765 aaKnown RBP7.5□□□□□ -1.21
USP47-201ENST00000305481 SHMT1P34896 483 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 GNAQP50148 359 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 NLRP12P59046 1061 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 ISM2Q6H9L7 571 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 SPC24Q8NBT2 197 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 ZDHHC15Q96MV8 337 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 OSBPL5Q9H0X9 879 aaPredicted RBP7.5□□□□□ -1.21
USP47-201ENST00000305481 BRMS1Q9HCU9 246 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 SH3GLB2Q9NR46 395 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 MTMR4Q9NYA4 1195 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 CEP131Q9UPN4 1083 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 USP17L5A8MUK1 530 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 STXBP3O00186 592 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 POLR2DO15514 142 aaKnown RBP7.5□□□□□ -1.21
USP47-201ENST00000305481 CACNB3P54284 484 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 TTC38Q5R3I4 469 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms