RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 MKRN3Q13064 507 aaKnown RBP23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 BLOC1S2Q6QNY1 142 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 USP17L2Q6R6M4 530 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 PAXIP1Q6ZW49 1069 aaPredicted RBP23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 PROCA1Q8NCQ7 364 aaPredicted RBP23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 TBC1D32Q96NH3 1257 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 TMEM47Q9BQJ4 181 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 UBAC1Q9BSL1 405 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 VCPKMTQ9H867 229 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 STX8Q9UNK0 236 aa23.56■■□□□ 1.36
SCAMP3-201ENST00000302631 AOC2O75106 756 aa23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 RPS6KB1P23443 525 aa23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 KIF23Q02241 960 aaPredicted RBP23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 RUFY3Q7L099 469 aa23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 REM2Q8IYK8 340 aaPredicted RBP23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 GMCL1P1Q8NEA9 526 aa23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 BRI3BPQ8WY22 251 aa23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 AGXT2Q9BYV1 514 aa23.55■■□□□ 1.36
SCAMP3-201ENST00000302631 SH2B2O14492 632 aaPredicted RBP23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 IFIT3O14879 490 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 CASTP20810 708 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 LIFRP42702 1097 aa23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 HMGCS2P54868 508 aa23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 SART3Q15020 963 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 KIAA1755Q5JYT7 1200 aa23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 FASTKD5Q7L8L6 764 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-201ENST00000302631 CCL15-CCL14A0A0B4J2E2 113 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 CPA1P15085 419 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 ATP2B2Q01814 1243 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 CCL15Q16663 113 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 GPAT2Q6NUI2 795 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 LPAR1Q92633 364 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 FEZ1Q99689 392 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 PTPN18Q99952 460 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 LY9Q9HBG7 655 aa23.53■■□□□ 1.36
SCAMP3-201ENST00000302631 F5H6K3 240 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 KLRC3Q07444 240 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 DGKZQ13574 1117 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 TMEM67Q5HYA8 995 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 TMTC2Q8N394 836 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 ALDH8A1Q9H2A2 487 aaPredicted RBP23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 SENP2Q9HC62 589 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 GOPCQ9HD26 462 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 CYP46A1Q9Y6A2 500 aa23.52■■□□□ 1.36
SCAMP3-201ENST00000302631 ERICH2A1L162 156 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 SREBF2Q12772 1141 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 WTAPQ15007 396 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 IFIT1BQ5T764 474 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 ANKRD23Q86SG2 305 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 SGMS1Q86VZ5 419 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 LRRC47Q8N1G4 583 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 ZCCHC17Q9NP64 241 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 GPHNQ9NQX3 736 aaPredicted RBP23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 TMOD4Q9NZQ9 345 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 SLC45A1Q9Y2W3 748 aa23.51■■□□□ 1.35
SCAMP3-201ENST00000302631 SNHG28P0DPA3 235 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 HOXA7P31268 230 aaPredicted RBP23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 GRM1Q13255 1194 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 LRRC2Q9BYS8 371 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 AGTPBP1Q9UPW5 1226 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 PARP14Q460N5 1801 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 RLFQ13129 1914 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 BTBD19C9JJ37 291 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 NDUFB10O96000 172 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 VCAM1P19320 739 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 PNMA1Q8ND90 353 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 GMCL1Q96IK5 515 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 TCEANC2Q96MN5 208 aa23.5■■□□□ 1.35
SCAMP3-201ENST00000302631 IGF2BP3O00425 579 aaKnown RBP eCLIP23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 WDR46O15213 610 aaKnown RBP23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 TREML2Q5T2D2 321 aa23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 SLFN13Q68D06 897 aa23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 GADL1Q6ZQY3 521 aa23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 Q6ZUG5 572 aa23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 IFNL1Q8IU54 200 aa23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 UPF3BQ9BZI7 483 aaKnown RBP23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 KAT14Q9H8E8 782 aa23.49■■□□□ 1.35
SCAMP3-201ENST00000302631 EVCP57679 992 aa23.48■■□□□ 1.35
SCAMP3-201ENST00000302631 FAM43AQ8N2R8 423 aa23.48■■□□□ 1.35
SCAMP3-201ENST00000302631 PDHBP11177 359 aa23.47■■□□□ 1.35
SCAMP3-201ENST00000302631 TROAPQ12815 778 aa23.47■■□□□ 1.35
SCAMP3-201ENST00000302631 CATSPERGQ6ZRH7 1159 aa23.47■■□□□ 1.35
SCAMP3-201ENST00000302631 IL27Q8NEV9 243 aa23.47■■□□□ 1.35
SCAMP3-201ENST00000302631 DCAF4Q8WV16 495 aa23.47■■□□□ 1.35
SCAMP3-201ENST00000302631 TOB2Q14106 344 aaPredicted RBP23.46■■□□□ 1.35
SCAMP3-201ENST00000302631 SPICE1Q8N0Z3 855 aa23.46■■□□□ 1.35
SCAMP3-201ENST00000302631 MAP3K14Q99558 947 aa23.46■■□□□ 1.35
SCAMP3-201ENST00000302631 PDRG1Q9NUG6 133 aa23.46■■□□□ 1.35
SCAMP3-201ENST00000302631 USP17L15C9J2P7 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L13C9JLJ4 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L11C9JVI0 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L18D6R9N7 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L22D6RA61 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L17D6RBQ6 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L19D6RCP7 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L20D6RJB6 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 PLA2G6O60733 806 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 USP17L24Q0WX57 530 aa23.45■■□□□ 1.34
SCAMP3-201ENST00000302631 PABPC4Q13310 644 aaKnown RBP eCLIP23.45■■□□□ 1.349e-8■■■■□ 25.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms