RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ELF2Q15723 593 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 DYMQ7RTS9 669 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 NELFCDQ8IXH7 590 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 SPDYE1Q8NFV5 336 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 PLEKHA4Q9H4M7 779 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 AMFRQ9UKV5 643 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 PA2G4Q9UQ80 394 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 SART1O43290 800 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 NR1I2O75469 434 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ADCY8P40145 1251 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 MCUQ8NE86 351 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 LARSQ9P2J5 1176 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 LRWD1Q9UFC0 647 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 IPO11Q9UI26 975 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ZBED4O75132 1171 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 MBD4O95243 580 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 IGHDP01880 384 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 HP1BP3Q5SSJ5 553 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 SMAP1Q8IYB5 467 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 RNF169Q8NCN4 708 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 GRK7Q8WTQ7 553 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 TEKT1Q969V4 418 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 GARSP41250 739 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 LRMPQ12912 555 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 HADHQ16836 314 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ANKRD20A4Q4UJ75 823 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ANKRD20A8PQ5CZ79 823 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ANKRD20A2Q5SQ80 823 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ANKRD20A1Q5TYW2 823 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 PPP4R4Q6NUP7 873 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 CAPN12Q6ZSI9 719 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 FGD4Q96M96 766 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 WASLO00401 505 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 STAM2O75886 525 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 MYLK4Q86YV6 388 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 RNF217Q8TC41 542 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 POLKQ9UBT6 870 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 ATICP31939 592 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 ECE1P42892 770 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 GUCY2FP51841 1108 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 GRIN2AQ12879 1464 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 PDE6AP16499 860 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 IFRD2Q12894 506 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 ANKRD35Q8N283 1001 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 CCDC138Q96M89 665 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 KRT82Q9NSB4 513 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 SCHIP1Q9P0W5 487 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 ANAPC5Q9UJX4 755 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 POLR2DO15514 142 aaKnown RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 RNF8O76064 485 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 PEX19P40855 299 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 AP1ARQ63HQ0 302 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 NSMFQ6X4W1 530 aa11.42□□□□□ -0.58
CLIP1-201ENST00000302528 RBM17Q96I25 401 aaKnown RBP11.42□□□□□ -0.58
CLIP1-201ENST00000302528 FAM170AA1A519 330 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 XPAP23025 273 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 SLC39A6Q13433 755 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 HDAC1Q13547 482 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 SLF1Q9BQI6 1058 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 HELLSQ9NRZ9 838 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 ADCY7P51828 1080 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 STX1BP61266 288 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 ANO1Q5XXA6 986 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 NME8Q8N427 588 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 DRC3Q9H069 523 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 IRAK4Q9NWZ3 460 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 LMNB1P20700 586 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 GNGT1P63211 74 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 SMYD2Q9NRG4 433 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 IQCB1Q15051 598 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 PPWD1Q96BP3 646 aaKnown RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 GDAP1L1Q96MZ0 367 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 IFIH1Q9BYX4 1025 aaKnown RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 NVLO15381 856 aaKnown RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 TFCP2Q12800 502 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms