RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 KLRK1P26718 216 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 FAM237AA0A1B0GTK4 181 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 TSPY2A6NKD2 308 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 PARP10Q53GL7 1025 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 CNPY4Q8N129 248 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 TXLNBQ8N3L3 684 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 EEF2KMTQ96G04 330 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 PAGE5Q96GU1 130 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 RNF26Q9BY78 433 aaPredicted RBP15.23■□□□□ 0.03
CTDP1-202ENST00000299543 VPS16Q9H269 839 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 CTNND2Q9UQB3 1225 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 ATRNO75882 1429 aa15.23■□□□□ 0.03
CTDP1-202ENST00000299543 PLCD1P51178 756 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 PKN1Q16512 942 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 TTC38Q5R3I4 469 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 CELF1Q92879 486 aaKnown RBP15.22■□□□□ 0.03
CTDP1-202ENST00000299543 CWC15Q9P013 229 aaKnown RBP15.22■□□□□ 0.03
CTDP1-202ENST00000299543 A0A0U1RQJ8 604 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 AKR1B15C9JRZ8 316 aaPredicted RBP15.22■□□□□ 0.03
CTDP1-202ENST00000299543 ZRANB2O95218 330 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■■■ 40.7
CTDP1-202ENST00000299543 NTSR2O95665 410 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 RBL2Q08999 1139 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 ATRIPQ8WXE1 791 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 SYNRGQ9UMZ2 1314 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 SEC23AQ15436 765 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
CTDP1-202ENST00000299543 PUF60Q9UHX1 559 aaKnown RBP15.22■□□□□ 0.03
CTDP1-202ENST00000299543 RTL9Q8NET4 1388 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 FILIP1LQ4L180 1135 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 YY1AP1Q9H869 796 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 H3BQF6 201 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 N4BP3O15049 544 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.03
CTDP1-202ENST00000299543 KCND1Q9NSA2 647 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 PARP3Q9Y6F1 533 aa15.21■□□□□ 0.03
CTDP1-202ENST00000299543 STX10O60499 249 aa15.21■□□□□ 0.02
CTDP1-202ENST00000299543 BRD2P25440 801 aaKnown RBP15.21■□□□□ 0.02
CTDP1-202ENST00000299543 MMP14P50281 582 aa15.21■□□□□ 0.02
CTDP1-202ENST00000299543 SMC1AQ14683 1233 aaKnown RBP15.21■□□□□ 0.02
CTDP1-202ENST00000299543 MUM1L1Q5H9M0 696 aa15.21■□□□□ 0.02
CTDP1-202ENST00000299543 CTR9Q6PD62 1173 aa15.21■□□□□ 0.02
CTDP1-202ENST00000299543 TMEM139Q8IV31 216 aa15.21■□□□□ 0.02
CTDP1-202ENST00000299543 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.02
CTDP1-202ENST00000299543 DEF6Q9H4E7 631 aa15.21■□□□□ 0.02
CTDP1-202ENST00000299543 PHLPP2Q6ZVD8 1323 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 ZNF18P17022 549 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 PRDX5P30044 214 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 SARSP49591 514 aaKnown RBP15.2■□□□□ 0.02
CTDP1-202ENST00000299543 PPP2R3AQ06190 1150 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 SRBD1Q8N5C6 995 aaKnown RBP15.2■□□□□ 0.02
CTDP1-202ENST00000299543 BANK1Q8NDB2 785 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 MRPL44Q9H9J2 332 aaKnown RBP15.2■□□□□ 0.02
CTDP1-202ENST00000299543 MCM9Q9NXL9 1143 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 MINPP1Q9UNW1 487 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 PHACTR2O75167 634 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 CASP14P31944 242 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 FAM84BQ96KN1 310 aaPredicted RBP15.2■□□□□ 0.02
CTDP1-202ENST00000299543 NCAPGQ9BPX3 1015 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 RIOK1Q9BRS2 568 aaKnown RBP15.2■□□□□ 0.02
CTDP1-202ENST00000299543 ZNF652Q9Y2D9 606 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 MYH7P12883 1935 aa15.2■□□□□ 0.02
CTDP1-202ENST00000299543 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 GUCY2CP25092 1073 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 KCNJ6P48051 423 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 ZNF579Q8NAF0 562 aaKnown RBP15.19■□□□□ 0.02
CTDP1-202ENST00000299543 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 CCDC175P0C221 793 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 NR1I3Q14994 352 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 SPATA1Q5VX52 437 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 LEKR1Q6ZMV7 388 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
CTDP1-202ENST00000299543 TAB2Q9NYJ8 693 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 MECOMQ03112 1051 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 TROAPQ12815 778 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 ZNF569Q5MCW4 686 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 AK7Q96M32 723 aa15.19■□□□□ 0.02
CTDP1-202ENST00000299543 PRPF3O43395 683 aaKnown RBP15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TPM1P09493 284 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 KIF4BQ2VIQ3 1234 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TTC31Q49AM3 519 aaPredicted RBP15.18■□□□□ 0.02
CTDP1-202ENST00000299543 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
CTDP1-202ENST00000299543 ADAM21Q9UKJ8 722 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TBX2Q13207 712 aaPredicted RBP15.18■□□□□ 0.02
CTDP1-202ENST00000299543 CUL4BQ13620 913 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 MCM6Q14566 821 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TRIML1Q8N9V2 468 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TADA3O75528 432 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TFRCP02786 760 aaKnown RBP15.18■□□□□ 0.02
CTDP1-202ENST00000299543 TUBB4AP04350 444 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 ERCC5P28715 1186 aaPredicted RBP15.18■□□□□ 0.02
CTDP1-202ENST00000299543 RAD9BQ6WBX8 426 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 IQUBQ8NA54 791 aa15.18■□□□□ 0.02
CTDP1-202ENST00000299543 N4BP1O75113 896 aaKnown RBP15.17■□□□□ 0.02
CTDP1-202ENST00000299543 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms