RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 ATP2B1P20020 1258 aa22.58■■□□□ 1.2
NFIL3-201ENST00000297689 NAA30Q147X3 362 aaPredicted RBP22.58■■□□□ 1.2
NFIL3-201ENST00000297689 CT47A1Q5JQC4 288 aaPredicted RBP22.58■■□□□ 1.2
NFIL3-201ENST00000297689 RCSD1Q6JBY9 416 aa22.58■■□□□ 1.2
NFIL3-201ENST00000297689 FERMT2Q96AC1 680 aa22.58■■□□□ 1.2
NFIL3-201ENST00000297689 L2HGDHQ9H9P8 463 aa22.58■■□□□ 1.2
NFIL3-201ENST00000297689 SLFN14P0C7P3 912 aa22.57■■□□□ 1.2
NFIL3-201ENST00000297689 GRAPQ13588 217 aa22.57■■□□□ 1.2
NFIL3-201ENST00000297689 NOM1Q5C9Z4 860 aaKnown RBP22.57■■□□□ 1.2
NFIL3-201ENST00000297689 PDILTQ8N807 584 aa22.57■■□□□ 1.2
NFIL3-201ENST00000297689 GRAPLQ8TC17 118 aaPredicted RBP22.57■■□□□ 1.2
NFIL3-201ENST00000297689 ARPP21Q9UBL0 812 aaPredicted RBP22.57■■□□□ 1.2
NFIL3-201ENST00000297689 DACH1Q9UI36 760 aa22.57■■□□□ 1.2
NFIL3-201ENST00000297689 NMT2O60551 498 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 IGSF3O75054 1194 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 ERCC5P28715 1186 aaPredicted RBP22.56■■□□□ 1.2
NFIL3-201ENST00000297689 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 EPSTI1Q96J88 318 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 NFE2L3Q9Y4A8 694 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 PRKCSHP14314 528 aaPredicted RBP22.56■■□□□ 1.2
NFIL3-201ENST00000297689 ZNF827Q17R98 1081 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 PPP4R3BQ5MIZ7 849 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 PROM2Q8N271 834 aa22.56■■□□□ 1.2
NFIL3-201ENST00000297689 NRDCO43847 1150 aa22.55■■□□□ 1.2
NFIL3-201ENST00000297689 CYP2D6P10635 497 aa22.55■■□□□ 1.2
NFIL3-201ENST00000297689 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
NFIL3-201ENST00000297689 ZNF215Q9UL58 517 aaPredicted RBP22.55■■□□□ 1.2
NFIL3-201ENST00000297689 TOP1P11387 765 aaKnown RBP22.54■■□□□ 1.2
NFIL3-201ENST00000297689 PLCD1P51178 756 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 ATP2C1P98194 919 aaPredicted RBP22.54■■□□□ 1.2
NFIL3-201ENST00000297689 CCDC93Q567U6 631 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 NT5C2P49902 561 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 FAM47AQ5JRC9 791 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 FCHSD1Q86WN1 690 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 ANKS1AQ92625 1134 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 SYMPKQ92797 1274 aaKnown RBP22.54■■□□□ 1.2
NFIL3-201ENST00000297689 PAGE5Q96GU1 130 aa22.54■■□□□ 1.2
NFIL3-201ENST00000297689 SCG2P13521 617 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 VEGFAP15692 232 aaPredicted RBP22.53■■□□□ 1.2
NFIL3-201ENST00000297689 PFKFB3Q16875 520 aaPredicted RBP22.53■■□□□ 1.2
NFIL3-201ENST00000297689 TTC38Q5R3I4 469 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 APTXQ7Z2E3 356 aaKnown RBP22.53■■□□□ 1.2
NFIL3-201ENST00000297689 CTCFLQ8NI51 663 aaPredicted RBP22.53■■□□□ 1.2
NFIL3-201ENST00000297689 BRMS1Q9HCU9 246 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 TRAPPC10P48553 1259 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 DPYDQ12882 1025 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 CUL4BQ13620 913 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 REXO1L1PQ8IX06 675 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 DHX58Q96C10 678 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 ERO1AQ96HE7 468 aa22.53■■□□□ 1.2
NFIL3-201ENST00000297689 SERPINB2P05120 415 aa22.52■■□□□ 1.2
NFIL3-201ENST00000297689 NR1I3Q14994 352 aa22.52■■□□□ 1.2
NFIL3-201ENST00000297689 TRIM65Q6PJ69 517 aa22.52■■□□□ 1.2
NFIL3-201ENST00000297689 JAG2Q9Y219 1238 aa22.52■■□□□ 1.2
NFIL3-201ENST00000297689 CCP110O43303 1012 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 ZNF174Q15697 407 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 C12orf60Q5U649 245 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 TRMT44Q8IYL2 757 aaKnown RBP22.51■■□□□ 1.19
NFIL3-201ENST00000297689 GSDMAQ96QA5 445 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 SAMSN1Q9NSI8 373 aaKnown RBP22.51■■□□□ 1.19
NFIL3-201ENST00000297689 ADAMTS3O15072 1205 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 ETF1P62495 437 aaKnown RBP22.51■■□□□ 1.19
NFIL3-201ENST00000297689 DDR1Q08345 913 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 PTGDRQ13258 359 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 E2F4Q16254 413 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 SPTY2D1Q68D10 685 aaPredicted RBP22.51■■□□□ 1.19
NFIL3-201ENST00000297689 TC2NQ8N9U0 490 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 IL17RBQ9NRM6 502 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 ROBO3Q96MS0 1386 aa22.51■■□□□ 1.19
NFIL3-201ENST00000297689 BAZ2BQ9UIF8 2168 aaKnown RBP22.51■■□□□ 1.19
NFIL3-201ENST00000297689 A0A1B0GTH6 734 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 CD44P16070 742 aaKnown RBP22.5■■□□□ 1.19
NFIL3-201ENST00000297689 PTPN21Q16825 1174 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 SYT10Q6XYQ8 523 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 DGKHQ86XP1 1220 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 ARID3AQ99856 593 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 ANKIB1Q9P2G1 1089 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 LEMD3Q9Y2U8 911 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 PLSCR1O15162 318 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 ARHGAP6O43182 974 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 SLU7O95391 586 aaKnown RBP22.5■■□□□ 1.19
NFIL3-201ENST00000297689 USP17L8P0C7I0 530 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 GOLGA8FQ08AF8 430 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 GOLGA8DPQ0D2H9 430 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 TXNRD1Q16881 649 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 SPECC1LQ69YQ0 1117 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 CCDC34Q96HJ3 373 aa22.5■■□□□ 1.19
NFIL3-201ENST00000297689 CGNQ9P2M7 1197 aaKnown RBP22.5■■□□□ 1.19
NFIL3-201ENST00000297689 C4orf32Q8N8J7 132 aa22.49■■□□□ 1.19
NFIL3-201ENST00000297689 GPR101Q96P66 508 aaPredicted RBP22.49■■□□□ 1.19
NFIL3-201ENST00000297689 TSPY2A6NKD2 308 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 PPP1R3GB7ZBB8 358 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 GPSM2P81274 684 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 IL17AQ16552 155 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 HSP90AA4PQ58FG1 418 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 CDKAL1Q5VV42 579 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 SPATA1Q5VX52 437 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 FEZ1Q99689 392 aa22.48■■□□□ 1.19
NFIL3-201ENST00000297689 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms