RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ASPHQ12797 758 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 ZNF449Q6P9G9 518 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 RYBPQ8N488 228 aaPredicted RBP17.31■□□□□ 0.36
UBR3-201ENST00000272793 THAP12O43422 761 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 MTMR3Q13615 1198 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 GOLGA5Q8TBA6 731 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 VPS16Q9H269 839 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 KCNA1Q09470 495 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 CAPRIN1Q14444 709 aaKnown RBP17.31■□□□□ 0.36
UBR3-201ENST00000272793 CEP78Q5JTW2 689 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 VEZTQ9HBM0 779 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 CCNT1O60563 726 aaKnown RBP17.31■□□□□ 0.36
UBR3-201ENST00000272793 IFNB1P01574 187 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 LDHCP07864 332 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 STX1BP61266 288 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 KAZNQ674X7 775 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 SCYL2Q6P3W7 929 aa17.31■□□□□ 0.36
UBR3-201ENST00000272793 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
UBR3-201ENST00000272793 ZNF229Q9UJW7 825 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 KRT7P08729 469 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 MAPK8IP1Q9UQF2 711 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 PAK2Q13177 524 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 LRRC8CQ8TDW0 803 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 SMCR8Q8TEV9 937 aaPredicted RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 CFAP221Q4G0U5 840 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 TAGAPQ8N103 731 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 ZSCAN9O15535 394 aaPredicted RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 HSPA8P11142 646 aaKnown RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 ST5P78524 1137 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 FNDC3AQ9Y2H6 1198 aaKnown RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 A0A1B0GW55 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4L2P0CJ85 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4L3P0CJ86 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4L4P0CJ87 422 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4L5P0CJ88 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4L6P0CJ89 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4L7P0CJ90 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
UBR3-201ENST00000272793 DUX4Q9UBX2 424 aa17.3■□□□□ 0.36
UBR3-201ENST00000272793 MAP3K7O43318 606 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 KRT4P19013 534 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 ZSCAN26Q16670 478 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 ERO1AQ96HE7 468 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 SH3GL3Q99963 347 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
UBR3-201ENST00000272793 KRT75O95678 551 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 PRPSAP1Q14558 356 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 PEX26Q7Z412 305 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 GPC4O75487 556 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 TRIML2Q8N7C3 387 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 SPTLC2O15270 562 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 VCAM1P19320 739 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 CTNNA1P35221 906 aaKnown RBP17.29■□□□□ 0.36
UBR3-201ENST00000272793 PSMC1P62191 440 aaKnown RBP17.29■□□□□ 0.36
UBR3-201ENST00000272793 KRT17Q04695 432 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 SYCE1Q8N0S2 351 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 TMOD4Q9NZQ9 345 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 hCG_2014768A0A024R1R8 64 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 LVRNQ6Q4G3 990 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 PHF21AQ96BD5 680 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 LMCD1Q9NZU5 365 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 ELP1O95163 1332 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 XPAP23025 273 aaPredicted RBP17.29■□□□□ 0.36
UBR3-201ENST00000272793 ST7Q9NRC1 585 aa17.29■□□□□ 0.36
UBR3-201ENST00000272793 IQANK1A0A1B0GTG1 560 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 TNNI2P48788 182 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 TMEM247A6NEH6 219 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 BCRP11274 1271 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 STMN3Q9NZ72 180 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 LIG3P49916 1009 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 TTBK2Q6IQ55 1244 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
UBR3-201ENST00000272793 F13A1P00488 732 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
UBR3-201ENST00000272793 HABP4Q5JVS0 413 aaKnown RBP17.28■□□□□ 0.36
UBR3-201ENST00000272793 TTC19Q6DKK2 380 aaPredicted RBP17.28■□□□□ 0.36
UBR3-201ENST00000272793 IQCDQ96DY2 449 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 CSPG5O95196 566 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 E2F5Q15329 346 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 ING2Q9H160 280 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 ATP6V0A4Q9HBG4 840 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 ZNF711Q9Y462 761 aa17.28■□□□□ 0.36
UBR3-201ENST00000272793 GSNP06396 782 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 RXRAP19793 462 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 ATG16L1Q676U5 607 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 SV2BQ7L1I2 683 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 PPP6R3Q5H9R7 873 aaPredicted RBP17.27■□□□□ 0.36
UBR3-201ENST00000272793 TMTC2Q8N394 836 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 EPAS1Q99814 870 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.36
UBR3-201ENST00000272793 ESR2Q92731 530 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms