RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RRAGBQ5VZM2 374 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 NOA1Q8NC60 698 aaKnown RBP31.12■■■□□ 2.57
CBX4-201ENST00000269397 MSANTD4Q8NCY6 345 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 HNRNPLLQ8WVV9 542 aaKnown RBP31.12■■■□□ 2.57
CBX4-201ENST00000269397 LRP2BPQ9P2M1 347 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 L1RE1Q9UN81 338 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 NCAPH2Q6IBW4 605 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 TMTC2Q8N394 836 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 NAPGQ99747 312 aaPredicted RBP31.12■■■□□ 2.57
CBX4-201ENST00000269397 RNF216Q9NWF9 866 aaPredicted RBP31.12■■■□□ 2.57
CBX4-201ENST00000269397 ZBTB1Q9Y2K1 713 aa31.12■■■□□ 2.57
CBX4-201ENST00000269397 ADGRA1Q86SQ6 560 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 RNF26Q9BY78 433 aaPredicted RBP31.11■■■□□ 2.57
CBX4-201ENST00000269397 ABHD10Q9NUJ1 306 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 TRIM10Q9UDY6 481 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 FAN1Q9Y2M0 1017 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 TTF2Q9UNY4 1162 aaKnown RBP31.11■■■□□ 2.57
CBX4-201ENST00000269397 XDHP47989 1333 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 MYH6P13533 1939 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 CYP2D7A0A087X1C5 515 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 USP5P45974 858 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 PHF20Q9BVI0 1012 aa31.11■■■□□ 2.57
CBX4-201ENST00000269397 MROH5Q6ZUA9 1318 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 CTAGE15A4D2H0 777 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 CTAGE8P0CG41 777 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 ARHGAP25P42331 645 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 PTGDRQ13258 359 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 CTAGE6Q86UF2 777 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 CTAGE4Q8IX94 777 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 SEC23AQ15436 765 aa31.1■■■□□ 2.57
CBX4-201ENST00000269397 TRIM66O15016 1216 aa31.09■■■□□ 2.57
CBX4-201ENST00000269397 ERLIN1O75477 346 aa31.09■■■□□ 2.57
CBX4-201ENST00000269397 XBP1P17861 261 aa31.09■■■□□ 2.57
CBX4-201ENST00000269397 CHP1Q99653 195 aa31.09■■■□□ 2.57
CBX4-201ENST00000269397 TRIM34Q9BYJ4 488 aa31.09■■■□□ 2.57
CBX4-201ENST00000269397 ENAHQ8N8S7 591 aaPredicted RBP31.09■■■□□ 2.57
CBX4-201ENST00000269397 SLC4A9Q96Q91 983 aa31.09■■■□□ 2.57
CBX4-201ENST00000269397 TMTC1Q8IUR5 882 aa31.08■■■□□ 2.57
CBX4-201ENST00000269397 CCDC102AQ96A19 550 aa31.08■■■□□ 2.57
CBX4-201ENST00000269397 RNF41Q9H4P4 317 aaPredicted RBP31.08■■■□□ 2.57
CBX4-201ENST00000269397 TFR2Q9UP52 801 aa31.08■■■□□ 2.57
CBX4-201ENST00000269397 MYH3P11055 1940 aa31.08■■■□□ 2.57
CBX4-201ENST00000269397 POTEB2H3BUK9 544 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 GNAT2P19087 354 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 KRT9P35527 623 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 CASP8Q14790 479 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 GOLGA5Q8TBA6 731 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 MTRQ99707 1265 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 CARD10Q9BWT7 1032 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 ABCF2Q9UG63 623 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 GUCA1BQ9UMX6 200 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 COL5A2P05997 1499 aaPredicted RBP31.07■■■□□ 2.56
CBX4-201ENST00000269397 CYP7A1P22680 504 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 COPB1P53618 953 aaKnown RBP31.07■■■□□ 2.56
CBX4-201ENST00000269397 EVA1CP58658 441 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 TTC38Q5R3I4 469 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 C10orf67Q8IYJ2 551 aa31.07■■■□□ 2.56
CBX4-201ENST00000269397 ENC1O14682 589 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 FERMT2Q96AC1 680 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 PNPLA7Q6ZV29 1317 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 ACTN2P35609 894 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 FUT2Q10981 343 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 CT47A1Q5JQC4 288 aaPredicted RBP31.06■■■□□ 2.56
CBX4-201ENST00000269397 ESR2Q92731 530 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 CCDC51Q96ER9 411 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 PSD3Q9NYI0 1048 aa31.06■■■□□ 2.56
CBX4-201ENST00000269397 TIAM2Q8IVF5 1701 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 SEMA3EO15041 775 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 CYP26C1Q6V0L0 522 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 CADPS2Q86UW7 1296 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 HDAC6Q9UBN7 1215 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 MYO6Q9UM54 1294 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 ITIH6Q6UXX5 1313 aa31.05■■■□□ 2.56
CBX4-201ENST00000269397 FOXR1Q6PIV2 292 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 NELFBQ8WX92 580 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 LIMA1Q9UHB6 759 aaKnown RBP31.04■■■□□ 2.56
CBX4-201ENST00000269397 GDAQ9Y2T3 454 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 SOS2Q07890 1332 aaPredicted RBP31.04■■■□□ 2.56
CBX4-201ENST00000269397 TOGARAM1Q9Y4F4 1720 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 KCNJ18B7U540 433 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 ADAMTS3O15072 1205 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 EIF3JO75822 258 aaKnown RBP31.04■■■□□ 2.56
CBX4-201ENST00000269397 KCNJ12Q14500 433 aa31.04■■■□□ 2.56
CBX4-201ENST00000269397 IFIT1BQ5T764 474 aaKnown RBP31.04■■■□□ 2.56
CBX4-201ENST00000269397 DZIP3Q86Y13 1208 aaKnown RBP31.04■■■□□ 2.56
CBX4-201ENST00000269397 LRRIQ3A6PVS8 624 aaPredicted RBP31.03■■■□□ 2.56
CBX4-201ENST00000269397 PES1O00541 588 aaKnown RBP31.03■■■□□ 2.56
CBX4-201ENST00000269397 CYP19A1P11511 503 aaPredicted RBP31.03■■■□□ 2.56
CBX4-201ENST00000269397 FECHP22830 423 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 MCM7P33993 719 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 NPY5RQ15761 445 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 ZSCAN10Q96SZ4 725 aaPredicted RBP31.03■■■□□ 2.56
CBX4-201ENST00000269397 MYO1CO00159 1063 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 UBXN1Q04323 297 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 PAK1Q13153 545 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 E2F4Q16254 413 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 WHAMMP3Q1A5X7 153 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 TCP11X2Q5H9J9 407 aa31.03■■■□□ 2.56
CBX4-201ENST00000269397 PIK3AP1Q6ZUJ8 805 aa31.02■■■□□ 2.56
CBX4-201ENST00000269397 REXO2Q9Y3B8 237 aaKnown RBP31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms