RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 WASF1Q92558 559 aa17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 LRRC1Q9BTT6 524 aa17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 NAA15Q9BXJ9 866 aaKnown RBP17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 SYF2O95926 243 aaKnown RBP17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 IL15P40933 162 aaPredicted RBP17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 PAK1Q13153 545 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 MFSD6Q6ZSS7 791 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 B4GALNT4Q76KP1 1039 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 YY1AP1Q9H869 796 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 GOPCQ9HD26 462 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 TTC26A0AVF1 554 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 TLDC2A0PJX2 215 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 RNF225M0QZC1 329 aaPredicted RBP17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 TRIM31Q9BZY9 425 aa17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 V9GY48 417 aaPredicted RBP17.83■□□□□ 0.44
PRPF40B-201ENST00000261897 B4DLN1 442 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 EZRP15311 586 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 GUCY2DQ02846 1103 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 TBC1D10CQ8IV04 446 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 HNRNPLLQ8WVV9 542 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 TACC1O75410 805 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 RILPL1Q5EBL4 403 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 TTLL7Q6ZT98 887 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 CACNA2D4Q7Z3S7 1137 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 MSANTD4Q8NCY6 345 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 DMGDHQ9UI17 866 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 CDHR2Q9BYE9 1310 aa17.82■□□□□ 0.44
PRPF40B-201ENST00000261897 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 SNAP23O00161 211 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 EYA2O00167 538 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 KRT83P78385 493 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 CPLX4Q7Z7G2 160 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 UBXN6Q9BZV1 441 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 MOCS3O95396 460 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 STAT6P42226 847 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 NLRP5P59047 1200 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 APPBP2Q92624 585 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 UIMC1Q96RL1 719 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 MLXIPQ9HAP2 919 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 LRWD1Q9UFC0 647 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 NFU1Q9UMS0 254 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 TUBBP07437 444 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-201ENST00000261897 LRCH2Q5VUJ6 765 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 NFRKBQ6P4R8 1299 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 PIK3AP1Q6ZUJ8 805 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 RASGRP2Q7LDG7 609 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 USP6P35125 1406 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 A0A1B0GTH6 734 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 HOXB7P09629 217 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 IFFO1Q0D2I5 559 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 IFIT5Q13325 482 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 PTPAQ15257 358 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 RAB21Q9UL25 225 aa17.8■□□□□ 0.44
PRPF40B-201ENST00000261897 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 MBD4O95243 580 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 TBX2Q13207 712 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 PRPF38AQ8NAV1 312 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 NBPF3Q9H094 633 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 HAUS4Q9H6D7 363 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 ADD3Q9UEY8 706 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 TMCO5BA8MYB1 307 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 UBLCP1Q8WVY7 318 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 LACRTQ9GZZ8 138 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 ZHX3Q9H4I2 956 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 EPB41L5Q9HCM4 733 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 ADGRL3Q9HAR2 1447 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 UBN2Q6ZU65 1347 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 CHRNA2Q15822 529 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 PAGE5Q96GU1 130 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 RIPOR2Q9Y4F9 1068 aa17.79■□□□□ 0.44
PRPF40B-201ENST00000261897 CLTAP09496 248 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 KLK7P49862 253 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 MAGEB6Q8N7X4 407 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 IQUBQ8NA54 791 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 UHMK1Q8TAS1 419 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 PPLO60437 1756 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 RIMS1Q86UR5 1692 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 KIF4AO95239 1232 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 GCKP35557 465 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 ALS2CR12Q96Q35 445 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 NLRC4Q9NPP4 1024 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 ZNF532Q9HCE3 1301 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 LTKP29376 864 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms