RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NFKBIAP25963 317 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TFDP1Q14186 410 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 WDR11Q9BZH6 1224 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ATP8B1O43520 1251 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TMOD1P28289 359 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 SLC1A4P43007 532 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 KIF22Q14807 665 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 MAATS1Q7Z4T9 603 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CSADQ9Y600 493 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CPS1P31327 1500 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 SPATA31A6Q5VVP1 1343 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TMCO5BA8MYB1 307 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 IGHDP01880 384 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CAMK4Q16566 473 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ERO1AQ96HE7 468 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZSWIM6Q9HCJ5 1215 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 USP21Q9UK80 565 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PIK3C2BO00750 1634 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZNF853P0CG23 659 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TRIM28Q13263 835 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 C20orf194Q5TEA3 1177 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 SAMD3Q8N6K7 520 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 NEK9Q8TD19 979 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZKSCAN3Q9BRR0 538 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TRPC6Q9Y210 931 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 LMAN1P49257 510 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 FERMT3Q86UX7 667 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TRIM58Q8NG06 486 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PLEKHF1Q96S99 279 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TIPINQ9BVW5 301 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 GPHNQ9NQX3 736 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TXNDC16Q9P2K2 825 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PNMA3Q9UL41 463 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CEP170BQ9Y4F5 1589 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 LIFRP42702 1097 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CDC42EP1Q00587 391 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 NSMCE1Q8WV22 266 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 GSDMAQ96QA5 445 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PA2G4Q9UQ80 394 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 UTP11Q9Y3A2 253 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 VWDEQ8N2E2 1590 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 NPR1P16066 1061 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CCT6AP40227 531 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZBTB8OSQ8IWT0 167 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CFAP57Q96MR6 1250 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PPP1R12CQ9BZL4 782 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 SLIT1O75093 1534 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZNF521Q96K83 1311 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 HSPA8P11142 646 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CMA1P23946 247 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 EEF1GP26641 437 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TAX1BP1Q86VP1 789 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 POLR3EQ9NVU0 708 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 DLGAP5Q15398 846 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ALX1Q15699 326 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 MAP3K21Q5TCX8 1036 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ATP6V0A1Q93050 837 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 DHTKD1Q96HY7 919 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PDE4CQ08493 712 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 SH2D4BQ5SQS7 431 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ZSCAN10Q96SZ4 725 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TRIM62Q9BVG3 475 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 RIC8AQ9NPQ8 531 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ATP6V0A2Q9Y487 856 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 COL4A3BPQ9Y5P4 624 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 DIP2BQ9P265 1576 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 KNDC1Q76NI1 1749 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ADCY9O60503 1353 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 A0A1W2PRG0 241 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 KRT10P13645 584 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 TRPC3Q13507 836 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CHRNA2Q15822 529 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 PPP1R14CQ8TAE6 165 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 SMC6Q96SB8 1091 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 NSFL1CQ9UNZ2 370 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 DIS3Q9Y2L1 958 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 NOC2LQ9Y3T9 749 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 CARNS1A5YM72 827 aa4.79□□□□□ -1.64
VPS13C-202ENST00000261517 ILF2Q12905 390 aaKnown RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 BAG1Q99933 345 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-202ENST00000261517 NOP56O00567 594 aaKnown RBP4.78□□□□□ -1.64
VPS13C-202ENST00000261517 KIAA0391O15091 583 aaKnown RBP4.78□□□□□ -1.64
VPS13C-202ENST00000261517 PPARAQ07869 468 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 WHAMMP3Q1A5X7 153 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 BEND3Q5T5X7 828 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 ATP2A3Q93084 1043 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 KANSL2Q9H9L4 492 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 DACT1Q9NYF0 836 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 GTPBP6O43824 516 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-202ENST00000261517 MECOMQ03112 1051 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 LEO1Q8WVC0 666 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-202ENST00000261517 ZNF512BQ96KM6 892 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-202ENST00000261517 PLA2G12BQ9BX93 195 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 FBXO40Q9UH90 709 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 RASSF2P50749 326 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 AP3B2Q13367 1082 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 PPP1R21Q6ZMI0 780 aa4.78□□□□□ -1.64
VPS13C-202ENST00000261517 NAPGQ99747 312 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms