RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 CLCN1P35523 988 aa20.31■□□□□ 0.84
EFR3A-201ENST00000254624 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 FOSP01100 380 aaPredicted RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 GRAPQ13588 217 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 GPATCH4Q5T3I0 446 aaKnown RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 GRAPLQ8TC17 118 aaPredicted RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 NELFBQ8WX92 580 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 NOX5Q96PH1 765 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 GCNT3O95395 438 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 NT5C2P49902 561 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 ZNF445P59923 1031 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 TUBB2AQ13885 445 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 LRRC47Q8N1G4 583 aaKnown RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 TUBB2BQ9BVA1 445 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 IQCGQ9H095 443 aaKnown RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 M0QZ92 97 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 NPR1P16066 1061 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 ASPRV1Q53RT3 343 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 PPP1R14CQ8TAE6 165 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 TLR7Q9NYK1 1049 aaKnown RBP20.3■□□□□ 0.84
EFR3A-201ENST00000254624 EXOC3O60645 756 aa20.3■□□□□ 0.84
EFR3A-201ENST00000254624 CBX8Q9HC52 389 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 MAPK8IP1Q9UQF2 711 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 H7C1W4 665 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 PDIA3P30101 505 aaKnown RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 PTPN12Q05209 780 aaKnown RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 CCDC84Q86UT8 332 aaPredicted RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 MAK16Q9BXY0 300 aaKnown RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 PALD1Q9ULE6 856 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 ALAS1P13196 640 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 CBX1P83916 185 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 POLA2Q14181 598 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 NUCKS1Q9H1E3 243 aaKnown RBP20.29■□□□□ 0.84
EFR3A-201ENST00000254624 CDC42BPBQ9Y5S2 1711 aa20.29■□□□□ 0.84
EFR3A-201ENST00000254624 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 TPH2Q8IWU9 490 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 BEGAINQ9BUH8 593 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 MTRF1LQ9UGC7 380 aaKnown RBP20.28■□□□□ 0.84
EFR3A-201ENST00000254624 OR52Z1P0C646 297 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 ADD1P35611 737 aaKnown RBP20.28■□□□□ 0.84
EFR3A-201ENST00000254624 TMED8Q6PL24 325 aaPredicted RBP20.28■□□□□ 0.84
EFR3A-201ENST00000254624 CSRNP2Q9H175 543 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 CYP27B1O15528 508 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 PPM1FP49593 454 aaPredicted RBP20.28■□□□□ 0.84
EFR3A-201ENST00000254624 SLC9C1Q4G0N8 1177 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 JAKMIP2Q96AA8 810 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 LMBRD1Q9NUN5 540 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 NFE2L3Q9Y4A8 694 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 SERTAD1Q9UHV2 236 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 SETBP1Q9Y6X0 1596 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 OVOS2A0A0J9YW53 1432 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 OVOS2Q6IE36 1432 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 GRIPAP1Q4V328 841 aa20.28■□□□□ 0.84
EFR3A-201ENST00000254624 H0YCG3 227 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 FERP16591 822 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 ATP2A2P16615 1042 aaKnown RBP20.27■□□□□ 0.84
EFR3A-201ENST00000254624 RBSNQ9H1K0 784 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 DHX36Q9H2U1 1008 aaKnown RBP20.27■□□□□ 0.84
EFR3A-201ENST00000254624 SPC25Q9HBM1 224 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 BCRP11274 1271 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 ZNF75DP51815 510 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 MAEAQ7L5Y9 396 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 TMTC1Q8IUR5 882 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 CCDC117Q8IWD4 279 aaPredicted RBP20.27■□□□□ 0.84
EFR3A-201ENST00000254624 CAPZA3Q96KX2 299 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 PCDHB13Q9Y5F0 798 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 USP14P54578 494 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 PCDHA12Q9UN75 941 aa20.27■□□□□ 0.84
EFR3A-201ENST00000254624 hCG_1984214I3L0E3 225 aa20.27■□□□□ 0.83
EFR3A-201ENST00000254624 M0R2C6 588 aa20.27■□□□□ 0.83
EFR3A-201ENST00000254624 ZNF713Q8N859 430 aaPredicted RBP20.27■□□□□ 0.83
EFR3A-201ENST00000254624 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 SYT10Q6XYQ8 523 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
EFR3A-201ENST00000254624 TTLL1O95922 423 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 HACE1Q8IYU2 909 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 MLXIPQ9HAP2 919 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 LAMC1P11047 1609 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 GADD45BO75293 160 aaPredicted RBP20.26■□□□□ 0.83
EFR3A-201ENST00000254624 PFKFB1P16118 471 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 PRR16Q569H4 304 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 SUSD4Q5VX71 490 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 TEKT3Q9BXF9 490 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 CMA1P23946 247 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 VAV2P52735 878 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 CCDC26Q8TAB7 109 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 GOLGA5Q8TBA6 731 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 GLG1Q92896 1179 aa20.26■□□□□ 0.83
EFR3A-201ENST00000254624 RNF26Q9BY78 433 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms