RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 GBP3Q9H0R5 595 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 ACBD3Q9H3P7 528 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 FAM217BQ9NTX9 383 aaPredicted RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 MYO5AQ9Y4I1 1855 aaKnown RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 A0A1B0GTH6 734 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 ATP2B2Q01814 1243 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 APTXQ7Z2E3 356 aaKnown RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 CCDC148Q8NFR7 591 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 PANX2Q96RD6 677 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 STRBPQ96SI9 672 aaKnown RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 CAPN7Q9Y6W3 813 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 EBAG9O00559 213 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 ZNF185O15231 689 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 RANBP6O60518 1105 aaKnown RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 GSCP56915 257 aaPredicted RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
SF1-201ENST00000227503 TMEM87BQ96K49 555 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 CHP1Q99653 195 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
SF1-201ENST00000227503 ATP1A1P05023 1023 aaKnown RBP15.89■□□□□ 0.13
SF1-201ENST00000227503 SWT1Q5T5J6 900 aaKnown RBP15.89■□□□□ 0.13
SF1-201ENST00000227503 SGMS1Q86VZ5 419 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
SF1-201ENST00000227503 RRP36Q96EU6 259 aaKnown RBP15.89■□□□□ 0.13
SF1-201ENST00000227503 CD248Q9HCU0 757 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 INCENPQ9NQS7 918 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 GOLGA6CA6NDK9 693 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 GOLGA6DP0CG33 693 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 EVA1CP58658 441 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 AMPD2Q01433 879 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 ALX1Q15699 326 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 FAM76AQ8TAV0 307 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 SLC4A9Q96Q91 983 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 CRACR2AQ9BSW2 395 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 GOLGA6AQ9NYA3 693 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 ZBTB43O43298 467 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 GNGT1P63211 74 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 WHAMMP3Q1A5X7 153 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 KCNJ14Q9UNX9 436 aa15.89■□□□□ 0.13
SF1-201ENST00000227503 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 INPP5BP32019 993 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 USP14P54578 494 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 MORC3Q14149 939 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 COG1Q8WTW3 980 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 SELENOOQ9BVL4 669 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 VPS16Q9H269 839 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 EPB41L4AQ9HCS5 686 aaPredicted RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 TACC3Q9Y6A5 838 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 UBN2Q6ZU65 1347 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 CYP19A1P11511 503 aaPredicted RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 FGFR2P21802 821 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 SCP2P22307 547 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 EZH2Q15910 746 aaKnown RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 CMTR1Q8N1G2 835 aaKnown RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 TRMT112Q9UI30 125 aaKnown RBP15.88■□□□□ 0.13
SF1-201ENST00000227503 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
SF1-201ENST00000227503 BTBD18B2RXH4 712 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 UQCRFS1P1P0C7P4 283 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 ATP6V1AP38606 617 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
SF1-201ENST00000227503 TDO2P48775 406 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
SF1-201ENST00000227503 LRP6O75581 1613 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 GOLGA8AA7E2F4 631 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 PDE8AO60658 829 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 C2orf54Q08AI8 447 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 TMEM67Q5HYA8 995 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 WDR93Q6P2C0 686 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
SF1-201ENST00000227503 AIDAQ96BJ3 306 aa15.87■□□□□ 0.13
SF1-201ENST00000227503 NUP88Q99567 741 aaPredicted RBP15.87■□□□□ 0.13
SF1-201ENST00000227503 MYH3P11055 1940 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 LIFRP42702 1097 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 ATP1A2P50993 1020 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 PDCLQ13371 301 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 NFXL1Q6ZNB6 911 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 GPIHBP1Q8IV16 184 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
SF1-201ENST00000227503 ZSWIM5Q9P217 1185 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 ADD3Q9UEY8 706 aaKnown RBP15.86■□□□□ 0.13
SF1-201ENST00000227503 REXO2Q9Y3B8 237 aaKnown RBP15.86■□□□□ 0.13
SF1-201ENST00000227503 PATL2C9JE40 543 aaKnown RBP15.86■□□□□ 0.13
SF1-201ENST00000227503 H0YHG0 523 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 GUCY1A2P33402 732 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 DPYDQ12882 1025 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 PUM3Q15397 648 aaKnown RBP15.86■□□□□ 0.13
SF1-201ENST00000227503 IFNL3Q8IZI9 196 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 MLKLQ8NB16 471 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 LPIN2Q92539 896 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 CAPS2Q9BXY5 557 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms