RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 REXO2Q9Y3B8 237 aaKnown RBP14.06□□□□□ -0.16
NUP88-201ENST00000225696 V9GY48 417 aaPredicted RBP14.06□□□□□ -0.16
NUP88-201ENST00000225696 CYP2D7A0A087X1C5 515 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 MINDY4BA8MYZ0 360 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 VEGFAP15692 232 aaPredicted RBP14.05□□□□□ -0.16
NUP88-201ENST00000225696 EVX2Q03828 476 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 FUT2Q10981 343 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 MAP3K12Q12852 859 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 NPY5RQ15761 445 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 C10orf67Q8IYJ2 551 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 ABHD10Q9NUJ1 306 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 TAB2Q9NYJ8 693 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 TNKSO95271 1327 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 WTIPA6NIX2 430 aaPredicted RBP14.05□□□□□ -0.16
NUP88-201ENST00000225696 MYO1CO00159 1063 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 ENC1O14682 589 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 IL2RBP14784 551 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 FECHP22830 423 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 CASP8Q14790 479 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 SEC23AQ15436 765 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 IL17AQ16552 155 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 AK7Q96M32 723 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 PHF20Q9BVI0 1012 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 PSD3Q9NYI0 1048 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 CEP131Q9UPN4 1083 aa14.05□□□□□ -0.16
NUP88-201ENST00000225696 N4BP3O15049 544 aa14.04□□□□□ -0.16
NUP88-201ENST00000225696 ACTN2P35609 894 aa14.04□□□□□ -0.16
NUP88-201ENST00000225696 AMPD2Q01433 879 aa14.04□□□□□ -0.16
NUP88-201ENST00000225696 SART3Q15020 963 aaKnown RBP14.04□□□□□ -0.16
NUP88-201ENST00000225696 GOLGA5Q8TBA6 731 aa14.04□□□□□ -0.16
NUP88-201ENST00000225696 GSDMAQ96QA5 445 aa14.04□□□□□ -0.16
NUP88-201ENST00000225696 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
NUP88-201ENST00000225696 PLEKHG2Q9H7P9 1386 aa14.04□□□□□ -0.16
NUP88-201ENST00000225696 ERICH2A1L162 156 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 PPARAQ07869 468 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 SLC20A2Q08357 652 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 PTGDRQ13258 359 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 CNGA4Q8IV77 575 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 ENAHQ8N8S7 591 aaPredicted RBP14.03□□□□□ -0.16
NUP88-201ENST00000225696 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
NUP88-201ENST00000225696 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 E2F4Q16254 413 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 RRAGBQ5VZM2 374 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 UBAC1Q9BSL1 405 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 PLEKHA4Q9H4M7 779 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 TTF2Q9UNY4 1162 aaKnown RBP14.03□□□□□ -0.16
NUP88-201ENST00000225696 ZBTB1Q9Y2K1 713 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 GDAQ9Y2T3 454 aa14.03□□□□□ -0.16
NUP88-201ENST00000225696 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
NUP88-201ENST00000225696 CCDC196A0A1B0GTZ2 297 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 CTAGE15A4D2H0 777 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 LRRC10BA6NIK2 292 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 PDE8AO60658 829 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 CTAGE8P0CG41 777 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 KRT9P35527 623 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 KRT2P35908 639 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 COPB1P53618 953 aaKnown RBP14.02□□□□□ -0.16
NUP88-201ENST00000225696 FILIP1LQ4L180 1135 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.02□□□□□ -0.16
NUP88-201ENST00000225696 CTAGE6Q86UF2 777 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 CTAGE4Q8IX94 777 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 TNFRSF25Q93038 417 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 GDAP1L1Q96MZ0 367 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.16
NUP88-201ENST00000225696 LIMA1Q9UHB6 759 aaKnown RBP14.02□□□□□ -0.16
NUP88-201ENST00000225696 GUCA1BQ9UMX6 200 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 TIAM2Q8IVF5 1701 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 BCL9LQ86UU0 1499 aa14.02□□□□□ -0.16
NUP88-201ENST00000225696 MYH6P13533 1939 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
NUP88-201ENST00000225696 SLIT2O94813 1529 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 TRIM49BA6NDI0 452 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 ANKRD65E5RJM6 399 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 PDXDC2PQ6P474 469 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 SRLQ86TD4 932 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 IRF2BP1Q8IU81 584 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 TMTC1Q8IUR5 882 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 EEF2KMTQ96G04 330 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 MYO6Q9UM54 1294 aa14.02□□□□□ -0.17
NUP88-201ENST00000225696 SHANK3Q9BYB0 1731 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 SOS2Q07890 1332 aaPredicted RBP14.01□□□□□ -0.17
NUP88-201ENST00000225696 ITIH6Q6UXX5 1313 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 ZMYND10O75800 440 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 STARD3NLO95772 234 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 HINFPQ9BQA5 517 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 NACAP1Q9BZK3 213 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 RRP15Q9Y3B9 282 aaKnown RBP14.01□□□□□ -0.17
NUP88-201ENST00000225696 PNPLA7Q6ZV29 1317 aa14.01□□□□□ -0.17
NUP88-201ENST00000225696 COL5A2P05997 1499 aaPredicted RBP14.01□□□□□ -0.17
NUP88-201ENST00000225696 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
NUP88-201ENST00000225696 TTC26A0AVF1 554 aa14□□□□□ -0.17
NUP88-201ENST00000225696 KCNJ18B7U540 433 aa14□□□□□ -0.17
NUP88-201ENST00000225696 SEMA3EO15041 775 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms