RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CALM3P0DP25 149 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 ECE1P42892 770 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 FSTL1Q12841 308 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 PPP2R5BQ15173 497 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 NOL8Q76FK4 1167 aaKnown RBP16.42■□□□□ 0.22
SEC61B-201ENST00000223641 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
SEC61B-201ENST00000223641 PTPRFP10586 1907 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 SPDYE5A6NIY4 337 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 SCRN1Q12765 414 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
SEC61B-201ENST00000223641 BECN1Q14457 450 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
SEC61B-201ENST00000223641 LRRC47Q8N1G4 583 aaKnown RBP16.41■□□□□ 0.22
SEC61B-201ENST00000223641 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 MYL10Q9BUA6 226 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
SEC61B-201ENST00000223641 F5H6K3 240 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 PDHBP11177 359 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 ATP2B2Q01814 1243 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 PPATQ06203 517 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 KLRC3Q07444 240 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 MICU3Q86XE3 530 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 ERO1BQ86YB8 467 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 SLKQ9H2G2 1235 aaPredicted RBP16.4■□□□□ 0.22
SEC61B-201ENST00000223641 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
SEC61B-201ENST00000223641 PALM3A6NDB9 673 aaPredicted RBP16.39■□□□□ 0.21
SEC61B-201ENST00000223641 USP17L10C9JJH3 530 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 RXRAP19793 462 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 CDC27P30260 824 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEC61B-201ENST00000223641 BACE1P56817 501 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 SPP2Q13103 211 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 GRM4Q14833 912 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 NTRK3Q16288 839 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 NECAB1Q8N987 351 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 MAD2L2Q9UI95 211 aa16.39■□□□□ 0.21
SEC61B-201ENST00000223641 GOLGA8AA7E2F4 631 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 NDUFB10O96000 172 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
SEC61B-201ENST00000223641 CCT2P78371 535 aaKnown RBP16.38■□□□□ 0.21
SEC61B-201ENST00000223641 STK3Q13188 491 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 RTN1Q16799 776 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 DCAF4Q8WV16 495 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 INTS4Q96HW7 963 aaKnown RBP16.38■□□□□ 0.21
SEC61B-201ENST00000223641 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 GOPCQ9HD26 462 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
SEC61B-201ENST00000223641 KCNH4Q9UQ05 1017 aa16.38■□□□□ 0.21
SEC61B-201ENST00000223641 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 CXCL11O14625 94 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 CTDNEP1O95476 244 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 KIF5BP33176 963 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 USP14P54578 494 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 PPIL2Q13356 520 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 ASPRV1Q53RT3 343 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
SEC61B-201ENST00000223641 SLFN13Q68D06 897 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 RASGRP2Q7LDG7 609 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 SAPCD2Q86UD0 394 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 CCDC83Q8IWF9 413 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 CTCFLQ8NI51 663 aaPredicted RBP16.37■□□□□ 0.21
SEC61B-201ENST00000223641 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 LPAR1Q92633 364 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 SLC10A4Q96EP9 437 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
SEC61B-201ENST00000223641 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
SEC61B-201ENST00000223641 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
SEC61B-201ENST00000223641 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
SEC61B-201ENST00000223641 LOC285556D6RIA3 1793 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 IRF6O14896 467 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
SEC61B-201ENST00000223641 PARP1P09874 1014 aaKnown RBP16.36■□□□□ 0.21
SEC61B-201ENST00000223641 IFNAR1P17181 557 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 GJA5P36382 358 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 FUT2Q10981 343 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 MTMR2Q13614 643 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms