RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 NFXL1Q6ZNB6 911 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 GMCL1P1Q8NEA9 526 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 TANGO6Q9C0B7 1094 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 ZSWIM5Q9P217 1185 aa11.96□□□□□ -0.49
PSENEN-201ENST00000222266 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 WDR19Q8NEZ3 1342 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 CCDC69A6NI79 296 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 F5H6K3 240 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 TRPA1O75762 1119 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 FDX1P10109 184 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 HOXA7P31268 230 aaPredicted RBP11.95□□□□□ -0.5
PSENEN-201ENST00000222266 SLC1A4P43007 532 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
PSENEN-201ENST00000222266 EVX2Q03828 476 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 KLRC3Q07444 240 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 TMEM67Q5HYA8 995 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 CATIPQ7Z7H3 387 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 CWC22Q9HCG8 908 aaKnown RBP11.95□□□□□ -0.5
PSENEN-201ENST00000222266 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 PNMA2Q9UL42 364 aa11.95□□□□□ -0.5
PSENEN-201ENST00000222266 BAZ2AQ9UIF9 1905 aaKnown RBP11.95□□□□□ -0.5
PSENEN-201ENST00000222266 DDX60LQ5H9U9 1706 aaKnown RBP11.94□□□□□ -0.5
PSENEN-201ENST00000222266 TNKSO95271 1327 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 NEDD4P46934 1319 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 DOCK1Q14185 1865 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 IGKV6D-41A0A0C4DH26 115 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 PRC1O43663 620 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CALM1P0DP23 149 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CALM2P0DP24 149 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CALM3P0DP25 149 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 GUCY1A2P33402 732 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CCNA1P78396 465 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 COG2Q14746 738 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
PSENEN-201ENST00000222266 SLFN13Q68D06 897 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 DHX32Q7L7V1 743 aaKnown RBP11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CCDC84Q86UT8 332 aaPredicted RBP11.94□□□□□ -0.5
PSENEN-201ENST00000222266 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 MB21D1Q8N884 522 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 ACER1Q8TDN7 264 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 DCAF4Q8WV16 495 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 GMCL1Q96IK5 515 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CFHR5Q9BXR6 569 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 RPAP3Q9H6T3 665 aaPredicted RBP11.94□□□□□ -0.5
PSENEN-201ENST00000222266 INCENPQ9NQS7 918 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 RNF186Q9NXI6 227 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
PSENEN-201ENST00000222266 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 LAMB1P07942 1786 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 FLOT1O75955 427 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 BMP3P12645 472 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 VCAM1P19320 739 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 KIF5BP33176 963 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 JAG1P78504 1218 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 TRAF1Q13077 416 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
PSENEN-201ENST00000222266 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
PSENEN-201ENST00000222266 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 ANKS1AQ92625 1134 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
PSENEN-201ENST00000222266 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 EMILIN3Q9NT22 766 aa11.93□□□□□ -0.5
PSENEN-201ENST00000222266 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.93□□□□□ -0.5
PSENEN-201ENST00000222266 A0A1W2PRG0 241 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 SMIM22K7EJ46 135 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 IGF2BP3O00425 579 aaKnown RBP eCLIP11.92□□□□□ -0.5
PSENEN-201ENST00000222266 TLR2O60603 784 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 ZBED4O75132 1171 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 COPB2P35606 906 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 LIFRP42702 1097 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 GNAQP50148 359 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 STAT2P52630 851 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 CATSPERGQ6ZRH7 1159 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 SPICE1Q8N0Z3 855 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
PSENEN-201ENST00000222266 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 CTCFLQ8NI51 663 aaPredicted RBP11.92□□□□□ -0.5
PSENEN-201ENST00000222266 KCNB2Q92953 911 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 ERO1AQ96HE7 468 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 ZKSCAN3Q9BRR0 538 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
PSENEN-201ENST00000222266 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
PSENEN-201ENST00000222266 IL17RBQ9NRM6 502 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
PSENEN-201ENST00000222266 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
PSENEN-201ENST00000222266 NDUFB10O96000 172 aa11.91□□□□□ -0.5
PSENEN-201ENST00000222266 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
PSENEN-201ENST00000222266 HSPA1AP0DMV8 641 aaKnown RBP11.91□□□□□ -0.5
PSENEN-201ENST00000222266 HSPA1BP0DMV9 641 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms