RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 IKBKBO14920 756 aa15.32■□□□□ 0.04
RAB3D-201ENST00000222120 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
RAB3D-201ENST00000222120 TCERG1LQ5VWI1 586 aa15.32■□□□□ 0.04
RAB3D-201ENST00000222120 WDR66Q8TBY9 1149 aa15.32■□□□□ 0.04
RAB3D-201ENST00000222120 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
RAB3D-201ENST00000222120 MST1RQ04912 1400 aa15.32■□□□□ 0.04
RAB3D-201ENST00000222120 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 TBC1D8BQ0IIM8 1120 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 PPP2R5BQ15173 497 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 CNGA4Q8IV77 575 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 FEZ1Q99689 392 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 PTPREP23469 700 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 MFSD14BQ5SR56 506 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 ARMCX5Q6P1M9 558 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 METTL16Q86W50 562 aaKnown RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 CSGALNACT2Q8N6G5 542 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 ZNF34Q8IZ26 560 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 IL17RAQ96F46 866 aa15.31■□□□□ 0.04
RAB3D-201ENST00000222120 SEPT11Q9NVA2 429 aaKnown RBP15.31■□□□□ 0.04
RAB3D-201ENST00000222120 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 KLRF2D3W0D1 207 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 GNA11P29992 359 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 SGMS1Q86VZ5 419 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 EYA3Q99504 573 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 FRMPD2Q68DX3 1309 aaPredicted RBP15.3■□□□□ 0.04
RAB3D-201ENST00000222120 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
RAB3D-201ENST00000222120 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 GTF2IP78347 998 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 ITPK1Q13572 414 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 TBC1D9BQ66K14 1250 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 CTAGE6Q86UF2 777 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 CTAGE4Q8IX94 777 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 GOLGA1Q92805 767 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 CENPHQ9H3R5 247 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 ARPP21Q9UBL0 812 aaPredicted RBP15.3■□□□□ 0.04
RAB3D-201ENST00000222120 SRPRBQ9Y5M8 271 aaKnown RBP15.3■□□□□ 0.04
RAB3D-201ENST00000222120 MACROD2A1Z1Q3 448 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 KIF20AO95235 890 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 CASP14P31944 242 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 PLCD1P51178 756 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 TSG101Q99816 390 aa15.3■□□□□ 0.04
RAB3D-201ENST00000222120 FAM170AA1A519 330 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 SMIM22K7EJ46 135 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 GGA1Q9UJY5 639 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 SMCO2A6NFE2 343 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 TECP42680 631 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 TCP10Q12799 353 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 CCDC122Q5T0U0 273 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 SPATA1Q5VX52 437 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
RAB3D-201ENST00000222120 CEP89Q96ST8 783 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 HINFPQ9BQA5 517 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 TBC1D7Q9P0N9 293 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 HLA-DOAP06340 250 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 LMAN1P49257 510 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 LRRC47Q8N1G4 583 aaKnown RBP15.29■□□□□ 0.04
RAB3D-201ENST00000222120 SLC4A9Q96Q91 983 aa15.29■□□□□ 0.04
RAB3D-201ENST00000222120 SOWAHDA6NJG2 315 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 SLFN14P0C7P3 912 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 LEKR1Q6ZMV7 388 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 FAM196AQ6ZSG2 479 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 CCDC42Q96M95 316 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 PSMB7Q99436 277 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 BSDC1Q9NW68 430 aaPredicted RBP15.28■□□□□ 0.04
RAB3D-201ENST00000222120 ALX1Q15699 326 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
RAB3D-201ENST00000222120 ATP8A2Q9NTI2 1148 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
RAB3D-201ENST00000222120 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
RAB3D-201ENST00000222120 RBL2Q08999 1139 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 MORC3Q14149 939 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 CRACR2AQ9BSW2 395 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 NOC4LQ9BVI4 516 aaKnown RBP15.28■□□□□ 0.04
RAB3D-201ENST00000222120 EPC1Q9H2F5 836 aa15.28■□□□□ 0.04
RAB3D-201ENST00000222120 SCNN1DP51172 638 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 CCZ1BP86790 482 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.04
RAB3D-201ENST00000222120 NONOQ15233 471 aaKnown RBP eCLIP15.27■□□□□ 0.04
RAB3D-201ENST00000222120 USP17L2Q6R6M4 530 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 PAGE5Q96GU1 130 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 CYLC1P35663 651 aaPredicted RBP15.27■□□□□ 0.04
RAB3D-201ENST00000222120 BTDP43251 543 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 CABP7Q86V35 215 aa15.27■□□□□ 0.04
RAB3D-201ENST00000222120 KCNJ18B7U540 433 aa15.27■□□□□ 0.03
RAB3D-201ENST00000222120 KCNJ12Q14500 433 aa15.27■□□□□ 0.03
RAB3D-201ENST00000222120 CTR9Q6PD62 1173 aa15.27■□□□□ 0.03
RAB3D-201ENST00000222120 CALCOCO1Q9P1Z2 691 aa15.27■□□□□ 0.03
RAB3D-201ENST00000222120 USP21Q9UK80 565 aa15.27■□□□□ 0.03
RAB3D-201ENST00000222120 TEX33O43247 280 aa15.26■□□□□ 0.03
RAB3D-201ENST00000222120 CAMTA2O94983 1202 aa15.26■□□□□ 0.03
RAB3D-201ENST00000222120 TUBB4AP04350 444 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms