RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 SLC27A3Q5K4L6 730 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 TMEM87AQ8NBN3 555 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 CXorf56Q9H5V9 222 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 EXOC1Q9NV70 894 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 CALML3P27482 149 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 GNAQP50148 359 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 NDUFA8P51970 172 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 FAM114A1Q8IWE2 563 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 ARFGAP2Q8N6H7 521 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 TDRD7Q8NHU6 1098 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 LPIN2Q92539 896 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 CABS1Q96KC9 395 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 HPDP32754 393 aaPredicted RBP13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 MTX1Q13505 466 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 GPR161Q8N6U8 529 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
TSPAN9-201ENST00000011898 PXDNLA1KZ92 1463 aa13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 PNMA6AP0CW24 399 aaPredicted RBP13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 CYLC1P35663 651 aaPredicted RBP13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 CLCN6P51797 869 aa13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 TUBB4BP68371 445 aa13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 CCDC40Q4G0X9 1142 aa13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 TTC14Q96N46 770 aa13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 UBA5Q9GZZ9 404 aa13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 ZCCHC17Q9NP64 241 aaKnown RBP13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.23
TSPAN9-201ENST00000011898 POLD1P28340 1107 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 CCT6AP40227 531 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 POTEAQ6S8J7 498 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 IGSF22Q8N9C0 903 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 IRAK4Q9NWZ3 460 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 PDIA6Q15084 440 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 CCDC50Q8IVM0 306 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 SUFUQ9UMX1 484 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 GUCA1BQ9UMX6 200 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 MAP3K15Q6ZN16 1313 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 ARHGAP6O43182 974 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 ASIC1P78348 528 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 UBXN1Q04323 297 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 PNOCQ13519 176 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 CFAP58Q5T655 872 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 EHBP1Q8NDI1 1231 aa13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
TSPAN9-201ENST00000011898 CACNA1FO60840 1977 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 BAG6P46379 1132 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 PLIN2Q99541 437 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 CLIC4Q9Y696 253 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 EIF3CLB5ME19 914 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 IGKV5-2P06315 115 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 CMA1P23946 247 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 WHAMMP3Q1A5X7 153 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 ALS2CR12Q96Q35 445 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 EIF3CQ99613 913 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 POSTNQ15063 836 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 SETDB2Q96T68 719 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 VPS16Q9H269 839 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 MAPK8IP1Q9UQF2 711 aa13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-201ENST00000011898 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 EPHA10Q5JZY3 1008 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 TRAPPC3LQ5T215 181 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 LMNTD2Q8IXW0 634 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 RNF168Q8IYW5 571 aaPredicted RBP13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 MYO1BO43795 1136 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 ADORA1P30542 326 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 RC3H1Q5TC82 1133 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 SPATA5Q8NB90 893 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 NAPAP54920 295 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 LACTBP83111 547 aaPredicted RBP13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 ITPK1Q13572 414 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms