RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MTRQ99707 1265 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 XDHP47989 1333 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 SEC23AQ15436 765 aa15.89■□□□□ 0.13
USH1C-201ENST00000005226 ENAHQ8N8S7 591 aaPredicted RBP15.89■□□□□ 0.13
USH1C-201ENST00000005226 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
USH1C-201ENST00000005226 A0A0G2JS52 829 aa15.89■□□□□ 0.13
USH1C-201ENST00000005226 CYP19A1P11511 503 aaPredicted RBP15.89■□□□□ 0.13
USH1C-201ENST00000005226 DYNLL1P63167 89 aaKnown RBP15.89■□□□□ 0.13
USH1C-201ENST00000005226 DZIP3Q86Y13 1208 aaKnown RBP15.89■□□□□ 0.13
USH1C-201ENST00000005226 EEF2KMTQ96G04 330 aa15.89■□□□□ 0.13
USH1C-201ENST00000005226 PHF20Q9BVI0 1012 aa15.89■□□□□ 0.13
USH1C-201ENST00000005226 SOS2Q07890 1332 aaPredicted RBP15.89■□□□□ 0.13
USH1C-201ENST00000005226 LRP6O75581 1613 aa15.89■□□□□ 0.13
USH1C-201ENST00000005226 ENC1O14682 589 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 TRIM66O15016 1216 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 NMT2O60551 498 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 ARHGAP25P42331 645 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 GPS2Q13227 327 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 SUSD4Q5VX71 490 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 CEP112Q8N8E3 955 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 HDAC6Q9UBN7 1215 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 FAN1Q9Y2M0 1017 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 GDAQ9Y2T3 454 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 MCM7P33993 719 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 FUT2Q10981 343 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 IL17AQ16552 155 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 FOXR1Q6PIV2 292 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 GUCA1BQ9UMX6 200 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 L1RE1Q9UN81 338 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 MROH5Q6ZUA9 1318 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 PES1O00541 588 aaKnown RBP15.88■□□□□ 0.13
USH1C-201ENST00000005226 TTC38Q5R3I4 469 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 TMTC2Q8N394 836 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 GSDMAQ96QA5 445 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
USH1C-201ENST00000005226 RNF26Q9BY78 433 aaPredicted RBP15.88■□□□□ 0.13
USH1C-201ENST00000005226 ABHD10Q9NUJ1 306 aa15.88■□□□□ 0.13
USH1C-201ENST00000005226 FEZ2Q9UHY8 353 aaPredicted RBP15.88■□□□□ 0.13
USH1C-201ENST00000005226 KRT9P35527 623 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 BRINP3Q76B58 766 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 HDXQ7Z353 690 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 NAPGQ99747 312 aaPredicted RBP15.87■□□□□ 0.13
USH1C-201ENST00000005226 ZNF142P52746 1687 aaPredicted RBP15.87■□□□□ 0.13
USH1C-201ENST00000005226 COL5A2P05997 1499 aaPredicted RBP15.87■□□□□ 0.13
USH1C-201ENST00000005226 TRIM49BA6NDI0 452 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 SRGAP2O75044 1071 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 COPB1P53618 953 aaKnown RBP15.87■□□□□ 0.13
USH1C-201ENST00000005226 NPY5RQ15761 445 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 CNGA4Q8IV77 575 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 GDAP1L1Q96MZ0 367 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 PLIN2Q99541 437 aa15.87■□□□□ 0.13
USH1C-201ENST00000005226 MYH8P13535 1937 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 GYG1P46976 350 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
USH1C-201ENST00000005226 NELFBQ8WX92 580 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 ESR2Q92731 530 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 CTAGE1Q96RT6 745 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 ZSCAN10Q96SZ4 725 aaPredicted RBP15.86■□□□□ 0.13
USH1C-201ENST00000005226 RAB21Q9UL25 225 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 PARP4Q9UKK3 1724 aaKnown RBP15.86■□□□□ 0.13
USH1C-201ENST00000005226 CTAGE15A4D2H0 777 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 CTAGE6Q86UF2 777 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 C10orf67Q8IYJ2 551 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 MSANTD4Q8NCY6 345 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 AK7Q96M32 723 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 TRIM34Q9BYJ4 488 aa15.86■□□□□ 0.13
USH1C-201ENST00000005226 RNF41Q9H4P4 317 aaPredicted RBP15.86■□□□□ 0.13
USH1C-201ENST00000005226 REXO2Q9Y3B8 237 aaKnown RBP15.86■□□□□ 0.13
USH1C-201ENST00000005226 NID2Q14112 1375 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 LRRIQ3A6PVS8 624 aaPredicted RBP15.85■□□□□ 0.13
USH1C-201ENST00000005226 KCNJ18B7U540 433 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 XBP1P17861 261 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 UBXN1Q04323 297 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 KCNJ12Q14500 433 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 EXOC4Q96A65 974 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 ZMYND10O75800 440 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 GNAT2P19087 354 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 CASP8Q14790 479 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 FAM47AQ5JRC9 791 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 TMTC1Q8IUR5 882 aa15.85■□□□□ 0.13
USH1C-201ENST00000005226 SRBD1Q8N5C6 995 aaKnown RBP15.85■□□□□ 0.13
USH1C-201ENST00000005226 TTF2Q9UNY4 1162 aaKnown RBP15.85■□□□□ 0.13
USH1C-201ENST00000005226 PRPF3O43395 683 aaKnown RBP15.84■□□□□ 0.13
USH1C-201ENST00000005226 E2F4Q16254 413 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 SKIDA1Q1XH10 827 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 CATIPQ7Z7H3 387 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 HNRNPLLQ8WVV9 542 aaKnown RBP15.84■□□□□ 0.13
USH1C-201ENST00000005226 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 PLEKHA4Q9H4M7 779 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 LIMA1Q9UHB6 759 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms