RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 MthfslL7N466 203 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Cyp3a25O09158 503 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Kcna1P16388 495 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 GnaqP21279 359 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 NyxP83503 476 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gpr162Q3UN16 588 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Mars2Q499X9 586 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Cnot7Q60809 285 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Senp6Q6P7W0 1132 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Rnf214Q8BFU3 668 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Pdcl3Q8BVF2 240 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Nop2Q922K7 793 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ppil2Q9D787 521 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ubxn8Q9QZ49 277 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ccdc112A0AUP1 442 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ccng2O08918 344 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 LdhaP06151 332 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Epha2Q03145 977 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Madcam1Q61826 405 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Znf653Q6YND2 615 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Prkag3Q8BGM7 489 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 RadxQ8C779 850 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Pdlim2Q8R1G6 349 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ascc2Q91WR3 749 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Eif4enif1Q9EST3 983 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 IkQ9Z1M8 557 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Pramel3A2AHA7 463 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gm7903A2AWL1 463 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 AV320801A2AWL3 467 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Pfkfb3A7UAK5 555 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gm15023L7MUB4 467 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Mx1P09922 631 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Sptlc2P97363 560 aaKnown RBP10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gm28047Q3US59 414 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Stxbp2Q64324 593 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Krt74Q6IFZ9 495 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Kctd3Q8BFX3 815 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Hps3Q91VB4 1002 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ndfip2Q91ZP6 311 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Col4a3bpQ9EQG9 624 aa10.01□□□□□ -0.81
Trim39-201ENSMUST00000042717 Tpd52l1O54818 204 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Mboat4P0C7A3 435 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 D630036H23RikQ3UQD6 204 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Sp4Q62445 782 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Zscan22Q8BGS5 496 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Med4Q9CQA5 270 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Tgm5Q9D7I9 724 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Cd2apQ9JLQ0 637 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Acot3Q9QYR7 432 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Col1a1P11087 1453 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Lamb1P02469 1786 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 SlkO54988 1233 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Lilrb3P97484 841 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Vps37dQ810I0 261 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gpatch3Q8BIY1 525 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Apobec3Q99J72 440 aaKnown RBP10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Glipr1l2Q9CQ35 332 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 4931400O07RikQ9D4M5 137 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 GdaQ9R111 454 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Sh3bgrQ9WUZ7 214 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Plxnb2B2RXS4 1842 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ccdc88aQ5SNZ0 1873 aa10□□□□□ -0.81
Trim39-201ENSMUST00000042717 Acot9Q9R0X4 439 aaKnown RBP9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Dock5B2RY04 1868 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Nova2D3YVV7 556 aaKnown RBP9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Samd1D3YXK1 519 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 1700113H08RikE9Q9Q5 327 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Phldb3E9QAF4 648 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gucy1a2F8VQK3 730 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 U2af2P26369 475 aaKnown RBP9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Rps12P63323 132 aaKnown RBP9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Exoc8Q6PGF7 716 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Clca4aQ6Q473 924 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 GrapQ9CX99 217 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Tnip1Q9WUU8 647 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Psme4Q5SSW2 1843 aa9.99□□□□□ -0.81
Trim39-201ENSMUST00000042717 Mctp1E9PV86 951 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Wnt7aP24383 349 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 C87499Q3UX49 493 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Akap4Q60662 849 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Grm4Q68EF4 912 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Scfd1Q8BRF7 639 aaKnown RBP9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Nod2Q8K3Z0 1020 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Arpp21Q9DCB4 807 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Pabpc1lA2A5N3 607 aaKnown RBP9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Dnai2A2AC93 623 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 MarcksP26645 309 aaKnown RBP9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Bach1P97302 739 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Prpf4bQ61136 1007 aaKnown RBP9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Plcd3Q8K2J0 785 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Onecut3Q8K557 490 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Vps16Q920Q4 839 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Stk32bQ9JJX8 414 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ktn1Q61595 1327 aaKnown RBP9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Myh8P13542 1937 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 A0A0U1RNP2 1173 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Kansl3A2RSY1 903 aaKnown RBP9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Mapk4Q6P5G0 583 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ms4a5Q810P8 197 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Cdan1Q8CC12 1239 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms