RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 LRRC10BA6NIK2 292 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 A1BGP04217 495 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 AARSP49588 968 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 FXR1P51114 621 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 ATRIPQ8WXE1 791 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 CDC5LQ99459 802 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 ABHD10Q9NUJ1 306 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 LRP6O75581 1613 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 TRIM75PA6NK02 468 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 PDE6AP16499 860 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 NOP2P46087 812 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 NAPBQ9H115 298 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 SUGCTQ9HAC7 445 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 LIMA1Q9UHB6 759 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 XBP1P17861 261 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 ARHGAP25P42331 645 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 STX17P56962 302 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 AMPD2Q01433 879 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 RIPOR2Q9Y4F9 1068 aa16.75■□□□□ 0.27
CACNA1A-220ENST00000635988 ERICH2A1L162 156 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 PPP1R3GB7ZBB8 358 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 N4BP3O15049 544 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 DPYDQ12882 1025 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 USP49Q70CQ1 688 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 RPGRIP1Q96KN7 1286 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 PIH1D3Q9NQM4 214 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 AFMP43652 599 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 NR5A1Q13285 461 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 PPP2R5BQ15173 497 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 MFSD6Q6ZSS7 791 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 FAM204AQ9H8W3 233 aa16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 IQSEC3Q9UPP2 1182 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-220ENST00000635988 ERVK-24P63145 666 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 WTAPQ15007 396 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 WWC2Q6AWC2 1192 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 LRRC31Q6UY01 552 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 IFNL3Q8IZI9 196 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 PYM1Q9BRP8 204 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 TCRBV5S4A2TA0A5A2 114 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 ERVV-2B6SEH9 535 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 PPFIA4O75335 1185 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 CORO7P57737 925 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 EIF3CQ99613 913 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 FAM107BQ9H098 131 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 AKAP11Q9UKA4 1901 aa16.73■□□□□ 0.27
CACNA1A-220ENST00000635988 TARSL2A2RTX5 802 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 ATP2B1P20020 1258 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 USP14P54578 494 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 KRT31Q15323 416 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 HOMEZQ8IX15 550 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 NOA1Q8NC60 698 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 HAUS4Q9H6D7 363 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 PSMD14O00487 310 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
CACNA1A-220ENST00000635988 RNF40O75150 1001 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 CKAP4Q07065 602 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 BCL9LQ86UU0 1499 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 PHACTR2O75167 634 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 KRT9P35527 623 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 CTDSPL2Q05D32 466 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 FANCBQ8NB91 859 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 EHBP1Q8NDI1 1231 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 SYMPKQ92797 1274 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 CTNND2Q9UQB3 1225 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms