RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 NMRK2Q9NPI5 230 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 CNPY2Q9Y2B0 182 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 TRIM75PA6NK02 468 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 F13A1P00488 732 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 GADL1Q6ZQY3 521 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 TMEM87BQ96K49 555 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 CELF2O95319 508 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 RPS6KB1P23443 525 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 SPICE1Q8N0Z3 855 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 TNKSO95271 1327 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 TAF1P21675 1872 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 ADM5C9JUS6 153 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 GJB2P29033 226 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 PLCD1P51178 756 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 ANKRD36CQ5JPF3 1778 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 USP50Q70EL3 339 aaPredicted RBP14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 SLC26A6Q9BXS9 759 aa14.41□□□□□ -0.1
SYNGAP1-207ENST00000628646 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 ASNSP08243 561 aa14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 C12orf60Q5U649 245 aa14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 PARP1P09874 1014 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 SF3A1Q15459 793 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 ZSCAN10Q96SZ4 725 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 ZHX2Q9Y6X8 837 aa14.4□□□□□ -0.1
SYNGAP1-207ENST00000628646 MMP14P50281 582 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 SSRP1Q08945 709 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 TBC1D10CQ8IV04 446 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 EPB41L4AQ9HCS5 686 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 MYH3P11055 1940 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 GNAQP50148 359 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 FUCA2Q9BTY2 467 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 BEGAINQ9BUH8 593 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 KANSL2Q9H9L4 492 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 SLX4Q8IY92 1834 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 PCP11498 1178 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 GUCY1B3Q02153 619 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 SEPT2Q15019 361 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 RASSF8Q8NHQ8 419 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 SMCR8Q8TEV9 937 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 TAF1DQ9H5J8 278 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 TCEAL9Q9UHQ7 104 aa14.39□□□□□ -0.11
SYNGAP1-207ENST00000628646 AKAP11Q9UKA4 1901 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 PNMA1Q8ND90 353 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZSWIM5Q9P217 1185 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 DDTLA6NHG4 134 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 CALM1P0DP23 149 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 CALM2P0DP24 149 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 CALM3P0DP25 149 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 HUNKP57058 714 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 ORC3Q9UBD5 711 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 ALX1Q15699 326 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 CPXCR1Q8N123 301 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 DDX4Q9NQI0 724 aaKnown RBP14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 ELP3Q9H9T3 547 aa14.38□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZNF831Q5JPB2 1677 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 UBE2Q2LH0YL09 131 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 SPP2Q13103 211 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 STOX1Q6ZVD7 989 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 WASF1Q92558 559 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 CCDC84Q86UT8 332 aaPredicted RBP14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZFPM1Q8IX07 1006 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 MYH7P12883 1935 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 TTLL1O95922 423 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 AKR1B1P15121 316 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 MSNP26038 577 aaKnown RBP14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 SLFN13Q68D06 897 aa14.37□□□□□ -0.11
SYNGAP1-207ENST00000628646 GAKO14976 1311 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 GOLGA8HP0CJ92 632 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 KIFC2Q96AC6 838 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 FZD1Q9UP38 647 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 ASTN2O75129 1339 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 FRMPD2Q68DX3 1309 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 TOP1P11387 765 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 NEDD4P46934 1319 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 FOXP2O15409 715 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 DNM1Q05193 864 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 PAGR1Q9BTK6 254 aa14.36□□□□□ -0.11
SYNGAP1-207ENST00000628646 NMT2O60551 498 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 EGFRP00533 1210 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 RHBDL3P58872 404 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 NLRP5P59047 1200 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 UBE2HP62256 183 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms