RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 APPBP2Q92624 585 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 C12orf42Q96LP6 360 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 FEZ1Q99689 392 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 TMEM106CQ9BVX2 250 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 KIAA1683Q9H0B3 1180 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 SWAP70Q9UH65 585 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 SALL3Q9BXA9 1300 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 MPHOSPH10O00566 681 aaKnown RBP21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 ERC2O15083 957 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 GLRX3O76003 335 aaKnown RBP21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 MX1P20591 662 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 FLT3LGP49771 235 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 HERVK_113P62684 666 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 CTR9Q6PD62 1173 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 GCC1Q96CN9 775 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 MORF4L1Q9UBU8 362 aa21.58■■□□□ 1.05
SCAMP4-213ENST00000621748 ZFYP08048 801 aaPredicted RBP21.57■■□□□ 1.04
SCAMP4-213ENST00000621748 MTFR1Q15390 333 aa21.57■■□□□ 1.04
SCAMP4-213ENST00000621748 POTEEQ6S8J3 1075 aa21.57■■□□□ 1.04
SCAMP4-213ENST00000621748 DDRGK1Q96HY6 314 aa21.57■■□□□ 1.04
SCAMP4-213ENST00000621748 TXNRD2Q9NNW7 524 aa21.57■■□□□ 1.04
SCAMP4-213ENST00000621748 TAOK2Q9UL54 1235 aa21.57■■□□□ 1.04
SCAMP4-213ENST00000621748 A0A1W2PRG0 241 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 GSG1L2A8MUP6 293 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 AKR1B1P15121 316 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 CDK8P49336 464 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 USP14P54578 494 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 COA7Q96BR5 231 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 RBPJLQ9UBG7 517 aa21.56■■□□□ 1.04
SCAMP4-213ENST00000621748 M0R2C6 588 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 VCAM1P19320 739 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 AAMPQ13685 434 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 TMEM179Q6ZVK1 233 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 C16orf86Q6ZW13 317 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 AMOTL1Q8IY63 956 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 EXOC6Q8TAG9 804 aa21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L15C9J2P7 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L13C9JLJ4 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L11C9JVI0 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L18D6R9N7 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L22D6RA61 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L17D6RBQ6 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L19D6RCP7 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L20D6RJB6 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 GPAA1O43292 621 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 ADCY3O60266 1144 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 USP17L24Q0WX57 530 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 IRF5Q13568 498 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 Q3C1V9 767 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 CATSPERGQ6ZRH7 1159 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 SIAH1Q8IUQ4 282 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 SLAIN1Q8ND83 568 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 GPRC5AQ8NFJ5 357 aa21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 BIN2Q9UBW5 565 aaPredicted RBP21.54■■□□□ 1.04
SCAMP4-213ENST00000621748 ELNP15502 786 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 GIMAP6Q6P9H5 292 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 CLEC10AQ8IUN9 316 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 SEC62Q99442 399 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 FSD1Q9BTV5 496 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 ARPP21Q9UBL0 812 aaPredicted RBP21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 STAP2Q9UGK3 403 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 GJD2Q9UKL4 321 aa21.53■■□□□ 1.04
SCAMP4-213ENST00000621748 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 PXYLP1Q8TE99 480 aa21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 CCDC17Q96LX7 622 aa21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 PAGR1Q9BTK6 254 aa21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 RPAP3Q9H6T3 665 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 EPB41L4AQ9HCS5 686 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 PLXNB2O15031 1838 aa21.52■■□□□ 1.04
SCAMP4-213ENST00000621748 IGHDP01880 384 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 CCL5P13501 91 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 GNAT2P19087 354 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 PDE1AP54750 535 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 ERVK-24P63145 666 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 KIAA1755Q5JYT7 1200 aa21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 GTF3C2Q8WUA4 911 aaPredicted RBP21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 RWDD1Q9H446 243 aaPredicted RBP21.51■■□□□ 1.03
SCAMP4-213ENST00000621748 MINDY4BA8MYZ0 360 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 CNMDO75829 334 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 UBXN2AP68543 259 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 ZMYM1Q5SVZ6 1142 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 SMC5Q8IY18 1101 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 STK11IPQ8N1F8 1099 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 LNPKQ9C0E8 428 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 PORCNQ9H237 461 aa21.5■■□□□ 1.03
SCAMP4-213ENST00000621748 PATL2C9JE40 543 aaKnown RBP21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 APPP05067 770 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 ICA1Q05084 483 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 IFNL3Q8IZI9 196 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 RNF208Q9H0X6 261 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 TMX2Q9Y320 296 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 RABGAP1Q9Y3P9 1069 aa21.49■■□□□ 1.03
SCAMP4-213ENST00000621748 SPDYE16A6NNV3 312 aaPredicted RBP21.48■■□□□ 1.03
SCAMP4-213ENST00000621748 INHAP05111 366 aa21.48■■□□□ 1.03
SCAMP4-213ENST00000621748 B4GALNT3Q6L9W6 998 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms