RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MTMR4Q9NYA4 1195 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 AFG3L2Q9Y4W6 797 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 RBM25P49756 843 aaKnown RBP26.75■■□□□ 1.87
CBWD3-213ENST00000618217 ZNF157P51786 506 aaPredicted RBP26.75■■□□□ 1.87
CBWD3-213ENST00000618217 ANTXR2P58335 489 aa26.75■■□□□ 1.87
CBWD3-213ENST00000618217 WNK4Q96J92 1243 aa26.75■■□□□ 1.87
CBWD3-213ENST00000618217 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.75■■□□□ 1.87
CBWD3-213ENST00000618217 PTPRFP10586 1907 aa26.74■■□□□ 1.87
CBWD3-213ENST00000618217 FAM155AB1AL88 458 aaPredicted RBP26.74■■□□□ 1.87
CBWD3-213ENST00000618217 HTRA3P83110 453 aa26.74■■□□□ 1.87
CBWD3-213ENST00000618217 PPIL2Q13356 520 aa26.74■■□□□ 1.87
CBWD3-213ENST00000618217 RASAL3Q86YV0 1011 aa26.74■■□□□ 1.87
CBWD3-213ENST00000618217 OTUD5Q96G74 571 aa26.74■■□□□ 1.87
CBWD3-213ENST00000618217 MYH4Q9Y623 1939 aa26.73■■□□□ 1.87
CBWD3-213ENST00000618217 DEFB115Q30KQ5 88 aa26.73■■□□□ 1.87
CBWD3-213ENST00000618217 SPRYD7Q5W111 196 aa26.73■■□□□ 1.87
CBWD3-213ENST00000618217 RCSD1Q6JBY9 416 aa26.73■■□□□ 1.87
CBWD3-213ENST00000618217 JAKMIP1Q96N16 626 aaKnown RBP26.73■■□□□ 1.87
CBWD3-213ENST00000618217 TBC1D2Q9BYX2 928 aa26.73■■□□□ 1.87
CBWD3-213ENST00000618217 TM6SF1Q9BZW5 370 aa26.73■■□□□ 1.87
CBWD3-213ENST00000618217 A0A1W2PRG0 241 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 IRF6O14896 467 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 EXOSC10Q01780 885 aaKnown RBP26.72■■□□□ 1.87
CBWD3-213ENST00000618217 ICA1Q05084 483 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 ZNF280CQ8ND82 737 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 ACER1Q8TDN7 264 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 ZKSCAN3Q9BRR0 538 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 UPF2Q9HAU5 1272 aaKnown RBP26.72■■□□□ 1.87
CBWD3-213ENST00000618217 NYAP2Q9P242 653 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 SLC10A3P09131 477 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 EEF2P13639 858 aaKnown RBP26.72■■□□□ 1.87
CBWD3-213ENST00000618217 MCM5P33992 734 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 CHST3Q7LGC8 479 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 CCDC102AQ96A19 550 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 ZSCAN10Q96SZ4 725 aaPredicted RBP26.72■■□□□ 1.87
CBWD3-213ENST00000618217 KCNH4Q9UQ05 1017 aa26.72■■□□□ 1.87
CBWD3-213ENST00000618217 HMGB1P09429 215 aaKnown RBP26.71■■□□□ 1.87
CBWD3-213ENST00000618217 ZBTB48P10074 688 aaPredicted RBP26.71■■□□□ 1.87
CBWD3-213ENST00000618217 SPP2Q13103 211 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 SEC23AQ15436 765 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 DHX32Q7L7V1 743 aaKnown RBP26.71■■□□□ 1.87
CBWD3-213ENST00000618217 IQCA1Q86XH1 822 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 TBC1D32Q96NH3 1257 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 KIF2CQ99661 725 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 AS3MTQ9HBK9 375 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 ZSWIM6Q9HCJ5 1215 aa26.71■■□□□ 1.87
CBWD3-213ENST00000618217 CPA1P15085 419 aa26.7■■□□□ 1.86
CBWD3-213ENST00000618217 CYP4F22Q6NT55 531 aa26.7■■□□□ 1.86
CBWD3-213ENST00000618217 ENAHQ8N8S7 591 aaPredicted RBP26.7■■□□□ 1.86
CBWD3-213ENST00000618217 ANKS1AQ92625 1134 aa26.7■■□□□ 1.86
CBWD3-213ENST00000618217 MKL1Q969V6 931 aa26.7■■□□□ 1.86
CBWD3-213ENST00000618217 TTC14Q96N46 770 aa26.7■■□□□ 1.86
CBWD3-213ENST00000618217 WDR19Q8NEZ3 1342 aa26.7■■□□□ 1.86
CBWD3-213ENST00000618217 CXCL11O14625 94 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 PRC1O43663 620 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 TTLL1O95922 423 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 PSMA5P28066 241 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 ECE1P42892 770 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 DGKHQ86XP1 1220 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 IGDCC4Q8TDY8 1250 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 MTA3Q9BTC8 594 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 CLIP2Q9UDT6 1046 aa26.69■■□□□ 1.86
CBWD3-213ENST00000618217 CASTP20810 708 aaKnown RBP26.68■■□□□ 1.86
CBWD3-213ENST00000618217 BLOC1S2Q6QNY1 142 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 MS4A4AQ96JQ5 239 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 UBAC1Q9BSL1 405 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 KIAA1683Q9H0B3 1180 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 TMX2Q9Y320 296 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 TNKSO95271 1327 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 TRIM75PA6NK02 468 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 USP17L10C9JJH3 530 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 BACE1P56817 501 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 CCDC178Q5BJE1 867 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 PPP4R3BQ5MIZ7 849 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 ARHGEF10LQ9HCE6 1279 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 STX8Q9UNK0 236 aa26.68■■□□□ 1.86
CBWD3-213ENST00000618217 RPS6KB1P23443 525 aa26.67■■□□□ 1.86
CBWD3-213ENST00000618217 RUFY3Q7L099 469 aa26.67■■□□□ 1.86
CBWD3-213ENST00000618217 CAPNS2Q96L46 248 aa26.67■■□□□ 1.86
CBWD3-213ENST00000618217 MKRN3Q13064 507 aaKnown RBP26.66■■□□□ 1.86
CBWD3-213ENST00000618217 MTMR2Q13614 643 aa26.66■■□□□ 1.86
CBWD3-213ENST00000618217 TCEANC2Q96MN5 208 aa26.66■■□□□ 1.86
CBWD3-213ENST00000618217 TMEM47Q9BQJ4 181 aa26.66■■□□□ 1.86
CBWD3-213ENST00000618217 GPHNQ9NQX3 736 aaPredicted RBP26.66■■□□□ 1.86
CBWD3-213ENST00000618217 SYNPO2Q9UMS6 1093 aa26.66■■□□□ 1.86
CBWD3-213ENST00000618217 A0A0G2JLL6 359 aaPredicted RBP26.65■■□□□ 1.86
CBWD3-213ENST00000618217 IFIT3O14879 490 aaKnown RBP26.65■■□□□ 1.86
CBWD3-213ENST00000618217 ATP2B2Q01814 1243 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 MOGSQ13724 837 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 SH3D19Q5HYK7 790 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 PRRT2Q7Z6L0 340 aaPredicted RBP26.65■■□□□ 1.86
CBWD3-213ENST00000618217 TMEM87BQ96K49 555 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 UPF3BQ9BZI7 483 aaKnown RBP26.65■■□□□ 1.86
CBWD3-213ENST00000618217 SENP2Q9HC62 589 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 C19orf81C9J6K1 198 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 LRRC2Q9BYS8 371 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 EMILIN3Q9NT22 766 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 CYP46A1Q9Y6A2 500 aa26.65■■□□□ 1.86
CBWD3-213ENST00000618217 LOC285556D6RIA3 1793 aa26.64■■□□□ 1.86
CBWD3-213ENST00000618217 SH2B2O14492 632 aaPredicted RBP26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 207.4 ms