RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, human

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RCC1L-204	ENST00000616051	SIAH1	Q8IUQ4	282 aa		32.61	■■■□□ 2.81
RCC1L-204	ENST00000616051	TBC1D32	Q96NH3	1257 aa		32.61	■■■□□ 2.81
RCC1L-204	ENST00000616051	MTMR4	Q9NYA4	1195 aa		32.61	■■■□□ 2.81
RCC1L-204	ENST00000616051	MCM5	P33992	734 aa		32.6	■■■□□ 2.81
RCC1L-204	ENST00000616051	PPAT	Q06203	517 aa		32.6	■■■□□ 2.81
RCC1L-204	ENST00000616051	IQCA1	Q86XH1	822 aa		32.6	■■■□□ 2.81
RCC1L-204	ENST00000616051	OPTN	Q96CV9	577 aa		32.6	■■■□□ 2.81
RCC1L-204	ENST00000616051	TM6SF1	Q9BZW5	370 aa		32.6	■■■□□ 2.81
RCC1L-204	ENST00000616051	HMGB1	P09429	215 aa	Known RBP	32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	ZNF157	P51786	506 aa	Predicted RBP	32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	ICA1	Q05084	483 aa		32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	OTUD5	Q96G74	571 aa		32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	CPA1	P15085	419 aa		32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	CAST	P20810	708 aa	Known RBP	32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	EXOSC10	Q01780	885 aa	Known RBP	32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	DHX32	Q7L7V1	743 aa	Known RBP	32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	WDR18	Q9BV38	432 aa		32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	AFG3L2	Q9Y4W6	797 aa		32.59	■■■□□ 2.81
RCC1L-204	ENST00000616051	GJA5	P36382	358 aa		32.58	■■■□□ 2.81
RCC1L-204	ENST00000616051	NOV	P48745	357 aa		32.58	■■■□□ 2.81
RCC1L-204	ENST00000616051	BLOC1S2	Q6QNY1	142 aa		32.58	■■■□□ 2.81
RCC1L-204	ENST00000616051	WNK4	Q96J92	1243 aa		32.58	■■■□□ 2.81
RCC1L-204	ENST00000616051	AS3MT	Q9HBK9	375 aa		32.58	■■■□□ 2.81
RCC1L-204	ENST00000616051	ZSWIM6	Q9HCJ5	1215 aa		32.58	■■■□□ 2.81
RCC1L-204	ENST00000616051	MYH4	Q9Y623	1939 aa		32.57	■■■□□ 2.81
RCC1L-204	ENST00000616051	PRC1	O43663	620 aa		32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	EEF2	P13639	858 aa	Known RBP	32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	ACER1	Q8TDN7	264 aa		32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	KIF2C	Q99661	725 aa		32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	UBAC1	Q9BSL1	405 aa		32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	TBC1D2	Q9BYX2	928 aa		32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	NYAP2	Q9P242	653 aa		32.57	■■■□□ 2.8
RCC1L-204	ENST00000616051	RASSF10	A6NK89	507 aa		32.56	■■■□□ 2.8
RCC1L-204	ENST00000616051	SPP2	Q13103	211 aa		32.56	■■■□□ 2.8
RCC1L-204	ENST00000616051	PPIL2	Q13356	520 aa		32.56	■■■□□ 2.8
RCC1L-204	ENST00000616051	RASAL3	Q86YV0	1011 aa		32.56	■■■□□ 2.8
RCC1L-204	ENST00000616051	ZNF280C	Q8ND82	737 aa		32.56	■■■□□ 2.8
RCC1L-204	ENST00000616051		A0A1W2PRG0	241 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	IRF6	O14896	467 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	TTLL1	O95922	423 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	HTRA3	P83110	453 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	DEFB115	Q30KQ5	88 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	CCDC178	Q5BJE1	867 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	SPRYD7	Q5W111	196 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	RCSD1	Q6JBY9	416 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	CLIP2	Q9UDT6	1046 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	TNKS	O95271	1327 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	RPS6KB1	P23443	525 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	ECE1	P42892	770 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	ATP2B2	Q01814	1243 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	PPP4R3B	Q5MIZ7	849 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	RUFY3	Q7L099	469 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	ENAH	Q8N8S7	591 aa	Predicted RBP	32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	IGDCC4	Q8TDY8	1250 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	TCEANC2	Q96MN5	208 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	TTC14	Q96N46	770 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	MTA3	Q9BTC8	594 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	STX8	Q9UNK0	236 aa		32.55	■■■□□ 2.8
RCC1L-204	ENST00000616051	WDR19	Q8NEZ3	1342 aa		32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	IFIT3	O14879	490 aa	Known RBP	32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	HSPA6	P17066	643 aa		32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	SEC23A	Q15436	765 aa		32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	DGKH	Q86XP1	1220 aa		32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	MKL1	Q969V6	931 aa		32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	UPF3B	Q9BZI7	483 aa	Known RBP	32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	ARHGEF10L	Q9HCE6	1279 aa		32.54	■■■□□ 2.8
RCC1L-204	ENST00000616051	TRIM75P	A6NK02	468 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	SLC10A3	P09131	477 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	ANKS1A	Q92625	1134 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	CCDC102A	Q96A19	550 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	LRRC2	Q9BYS8	371 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	CYP46A1	Q9Y6A2	500 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	PTPRF	P10586	1907 aa		32.53	■■■□□ 2.8
RCC1L-204	ENST00000616051	ZBTB48	P10074	688 aa	Predicted RBP	32.52	■■■□□ 2.8
RCC1L-204	ENST00000616051	SART3	Q15020	963 aa	Known RBP	32.52	■■■□□ 2.8
RCC1L-204	ENST00000616051	TMEM87B	Q96K49	555 aa		32.52	■■■□□ 2.8
RCC1L-204	ENST00000616051	KCNH4	Q9UQ05	1017 aa		32.52	■■■□□ 2.8
RCC1L-204	ENST00000616051	TMX2	Q9Y320	296 aa		32.52	■■■□□ 2.8
RCC1L-204	ENST00000616051	FAM155A	B1AL88	458 aa	Predicted RBP	32.51	■■■□□ 2.8
RCC1L-204	ENST00000616051	USP17L10	C9JJH3	530 aa		32.51	■■■□□ 2.8
RCC1L-204	ENST00000616051	CXCL11	O14625	94 aa		32.51	■■■□□ 2.8
RCC1L-204	ENST00000616051	MKRN3	Q13064	507 aa	Known RBP	32.51	■■■□□ 2.8
RCC1L-204	ENST00000616051	CYP4F22	Q6NT55	531 aa		32.51	■■■□□ 2.8
RCC1L-204	ENST00000616051	GPHN	Q9NQX3	736 aa	Predicted RBP	32.51	■■■□□ 2.8
RCC1L-204	ENST00000616051	ERICH2	A1L162	156 aa		32.51	■■■□□ 2.79
RCC1L-204	ENST00000616051	BACE1	P56817	501 aa		32.51	■■■□□ 2.79
RCC1L-204	ENST00000616051	TMEM67	Q5HYA8	995 aa		32.51	■■■□□ 2.79
RCC1L-204	ENST00000616051	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.51	■■■□□ 2.79
RCC1L-204	ENST00000616051	TMEM47	Q9BQJ4	181 aa		32.51	■■■□□ 2.79
RCC1L-204	ENST00000616051	KIAA1683	Q9H0B3	1180 aa		32.5	■■■□□ 2.79
RCC1L-204	ENST00000616051	SH2B2	O14492	632 aa	Predicted RBP	32.49	■■■□□ 2.79
RCC1L-204	ENST00000616051	MTMR2	Q13614	643 aa		32.49	■■■□□ 2.79
RCC1L-204	ENST00000616051	WTAP	Q15007	396 aa		32.49	■■■□□ 2.79
RCC1L-204	ENST00000616051	FEZ1	Q99689	392 aa		32.49	■■■□□ 2.79
RCC1L-204	ENST00000616051	SENP2	Q9HC62	589 aa		32.49	■■■□□ 2.79
RCC1L-204	ENST00000616051	TOP1	P11387	765 aa	Known RBP	32.48	■■■□□ 2.79
RCC1L-204	ENST00000616051	IFIT1B	Q5T764	474 aa	Known RBP	32.48	■■■□□ 2.79
RCC1L-204	ENST00000616051	LRRC47	Q8N1G4	583 aa	Known RBP	32.48	■■■□□ 2.79
RCC1L-204	ENST00000616051	SH2D4A	Q9H788	454 aa		32.48	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms