RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 SUGCTQ9HAC7 445 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 GOLGA8HP0CJ92 632 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 LPIN2Q92539 896 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 TACC3Q9Y6A5 838 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 OATP04181 439 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 DIXDC1Q155Q3 683 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 APPBP2Q92624 585 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 DKC1O60832 514 aaKnown RBP eCLIP20.77■□□□□ 0.91
GABPB1-212ENST00000615671 GKAP1Q5VSY0 366 aaPredicted RBP20.77■□□□□ 0.91
GABPB1-212ENST00000615671 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.77■□□□□ 0.91
GABPB1-212ENST00000615671 IGSF3O75054 1194 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 PPP2R3AQ06190 1150 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 PRIMPOLQ96LW4 560 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 PCDHB13Q9Y5F0 798 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 RIOK3O14730 519 aaKnown RBP20.76■□□□□ 0.91
GABPB1-212ENST00000615671 GAS7O60861 476 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 GYG1P46976 350 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 ZNF131P52739 623 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 RILPL1Q5EBL4 403 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 FAM182BQ5T319 152 aa20.76■□□□□ 0.91
GABPB1-212ENST00000615671 NELFBQ8WX92 580 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 USP19O94966 1318 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 PRR16Q569H4 304 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
GABPB1-212ENST00000615671 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 RPRD2Q5VT52 1461 aaKnown RBP20.75■□□□□ 0.91
GABPB1-212ENST00000615671 CEP104O60308 925 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 PDE6BP35913 854 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 SDR42E1Q8WUS8 393 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 USP26Q9BXU7 913 aa20.75■□□□□ 0.91
GABPB1-212ENST00000615671 PALM3A6NDB9 673 aaPredicted RBP20.75■□□□□ 0.91
GABPB1-212ENST00000615671 PRPF31Q8WWY3 499 aaKnown RBP20.75■□□□□ 0.91
GABPB1-212ENST00000615671 CLRN2A0PK11 232 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 C8orf74Q6P047 294 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 ZNF710Q8N1W2 664 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 CCDC89Q8N998 374 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 CDCA7Q9BWT1 371 aaPredicted RBP20.74■□□□□ 0.91
GABPB1-212ENST00000615671 TRPM2O94759 1503 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 TBC1D8O95759 1140 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 VWA3BQ502W6 1294 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 STMN2Q93045 179 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 AS3MTQ9HBK9 375 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 CD2APQ9Y5K6 639 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 SMCO2A6NFE2 343 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 CYP26C1Q6V0L0 522 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 TEKT1Q969V4 418 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 ZMYM3Q14202 1370 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 SNX14Q9Y5W7 946 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 KRT81Q14533 505 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 ANKRD35Q8N283 1001 aa20.74■□□□□ 0.91
GABPB1-212ENST00000615671 EDC3Q96F86 508 aaKnown RBP20.74■□□□□ 0.91
GABPB1-212ENST00000615671 CAPN9O14815 690 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 FAM76AQ8TAV0 307 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 MGARPQ8TDB4 240 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 FYB2Q5VWT5 728 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 ANKFY1Q9P2R3 1169 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 TECP42680 631 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 UBXN2AP68543 259 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 SKA2Q8WVK7 121 aaPredicted RBP20.73■□□□□ 0.91
GABPB1-212ENST00000615671 SAT1P21673 171 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 NLRC4Q9NPP4 1024 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 CAPN12Q6ZSI9 719 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 NBPF11Q86T75 865 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
GABPB1-212ENST00000615671 KRT25Q7Z3Z0 450 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 SDCCAG8Q86SQ7 713 aaPredicted RBP20.72■□□□□ 0.91
GABPB1-212ENST00000615671 RAD50Q92878 1312 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 OTUD6AQ7L8S5 288 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 HACE1Q8IYU2 909 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 STIM2Q9P246 746 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 TYW1BQ6NUM6 668 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 FAM184BQ9ULE4 1060 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 ABCB4P21439 1286 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 PPARAQ07869 468 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 CCDC105Q8IYK2 499 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 PPP1R16BQ96T49 567 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 FAM207AQ9NSI2 230 aaPredicted RBP20.72■□□□□ 0.91
GABPB1-212ENST00000615671 MROH5Q6ZUA9 1318 aa20.72■□□□□ 0.91
GABPB1-212ENST00000615671 SEC24BO95487 1268 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
GABPB1-212ENST00000615671 SLC5A4Q9NY91 659 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 GCKRQ14397 625 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 SULF1Q8IWU6 871 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 VPS37BQ9H9H4 285 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 DUOX2Q9NRD8 1548 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 LIG4P49917 911 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 XKR9Q5GH70 373 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 NAPGQ99747 312 aaPredicted RBP20.71■□□□□ 0.91
GABPB1-212ENST00000615671 NBPF3Q9H094 633 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 NR1I2O75469 434 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 BCAMP50895 628 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 PNOCQ13519 176 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 KIF9Q9HAQ2 790 aa20.71■□□□□ 0.91
GABPB1-212ENST00000615671 GPKOWQ92917 476 aaPredicted RBP eCLIP20.7■□□□□ 0.91
GABPB1-212ENST00000615671 SECISBP2LQ93073 1101 aaKnown RBP20.7■□□□□ 0.91
GABPB1-212ENST00000615671 KDRP35968 1356 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 JAK2O60674 1132 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 GPBP1Q86WP2 473 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 CACYBPQ9HB71 228 aaKnown RBP20.7■□□□□ 0.9
GABPB1-212ENST00000615671 EVCP57679 992 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms