RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SH3RF3Q8TEJ3 882 aaPredicted RBP18.27■□□□□ 0.51
RTN1-209ENST00000611068 EPC1Q9H2F5 836 aa18.27■□□□□ 0.51
RTN1-209ENST00000611068 CACNA1SQ13698 1873 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 ANKRD31Q8N7Z5 1873 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 CCDC189A1A4V9 331 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 IFIT3O14879 490 aaKnown RBP18.26■□□□□ 0.51
RTN1-209ENST00000611068 ALX1Q15699 326 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 TMEM67Q5HYA8 995 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 IQUBQ8NA54 791 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 NSUN7Q8NE18 718 aaKnown RBP18.26■□□□□ 0.51
RTN1-209ENST00000611068 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 DBNDD1Q9H9R9 158 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 ORC3Q9UBD5 711 aaPredicted RBP18.26■□□□□ 0.51
RTN1-209ENST00000611068 USP17L8P0C7I0 530 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 AGXT2Q9BYV1 514 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 HPS5Q9UPZ3 1129 aa18.26■□□□□ 0.51
RTN1-209ENST00000611068 G3V3G9 751 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 H0YIN7 160 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 DCAF8Q5TAQ9 597 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 MCTP2Q6DN12 878 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 ZC3H12CQ9C0D7 883 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 BAZ2AQ9UIF9 1905 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 RANBP6O60518 1105 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 BAG6P46379 1132 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 CCZ1BP86790 482 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 CCZ1P86791 482 aaPredicted RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 GRIPAP1Q4V328 841 aa18.25■□□□□ 0.51
RTN1-209ENST00000611068 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
RTN1-209ENST00000611068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.25■□□□□ 0.51
RTN1-209ENST00000611068 UBE2Q2LH0YL09 131 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 ALDH1B1P30837 517 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 MAP3K11Q16584 847 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 FILIP1Q7Z7B0 1213 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 TGFBRAP1Q8WUH2 860 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 DCP1AQ9NPI6 582 aaPredicted RBP18.24■□□□□ 0.51
RTN1-209ENST00000611068 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 ANGEL1Q9UNK9 670 aaKnown RBP18.24■□□□□ 0.51
RTN1-209ENST00000611068 H3BQV1 296 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 IRF6O14896 467 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 FAM47AQ5JRC9 791 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 SWT1Q5T5J6 900 aaKnown RBP18.24■□□□□ 0.51
RTN1-209ENST00000611068 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 IGDCC4Q8TDY8 1250 aa18.24■□□□□ 0.51
RTN1-209ENST00000611068 ARGLU1Q9NWB6 273 aaPredicted RBP18.24■□□□□ 0.51
RTN1-209ENST00000611068 NMT2O60551 498 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 LIG1P18858 919 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 USP5P45974 858 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 SCNN1DP51172 638 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 SUGP1Q8IWZ8 645 aaKnown RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 RNF217Q8TC41 542 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 EXOC4Q96A65 974 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 MED4Q9NPJ6 270 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 CCDC69A6NI79 296 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 CEBPZQ03701 1054 aaKnown RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 SPTY2D1Q68D10 685 aaPredicted RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 MAPKAPK5Q8IW41 473 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 PHKBQ93100 1093 aa18.23■□□□□ 0.51
RTN1-209ENST00000611068 ZNF274Q96GC6 653 aaPredicted RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
RTN1-209ENST00000611068 CPLX1O14810 134 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 ZBTB7AO95365 584 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 DYNLL2Q96FJ2 89 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 LY9Q9HBG7 655 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
RTN1-209ENST00000611068 H3BQF6 201 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 CDC27P30260 824 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 MAP2K2P36507 400 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 NUP133Q8WUM0 1156 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 SGSM3Q96HU1 749 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 AIFM3Q96NN9 605 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 NUP62CLQ9H1M0 184 aa18.22■□□□□ 0.51
RTN1-209ENST00000611068 KIF1CO43896 1103 aaKnown RBP18.21■□□□□ 0.51
RTN1-209ENST00000611068 FDPSP14324 419 aaKnown RBP18.21■□□□□ 0.51
RTN1-209ENST00000611068 IL1R1P14778 569 aa18.21■□□□□ 0.51
RTN1-209ENST00000611068 HMGB2P26583 209 aaKnown RBP18.21■□□□□ 0.51
RTN1-209ENST00000611068 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.51
RTN1-209ENST00000611068 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
RTN1-209ENST00000611068 UBXN4Q92575 508 aa18.21■□□□□ 0.51
RTN1-209ENST00000611068 C21orf2O43822 256 aa18.21■□□□□ 0.51
RTN1-209ENST00000611068 STAG1Q8WVM7 1258 aa18.21■□□□□ 0.51
RTN1-209ENST00000611068 DNAJC25Q9H1X3 360 aa18.21■□□□□ 0.51
RTN1-209ENST00000611068 ZSCAN16Q9H4T2 348 aaPredicted RBP18.21■□□□□ 0.51
RTN1-209ENST00000611068 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
RTN1-209ENST00000611068 ELP1O95163 1332 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 BTDP43251 543 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 METAP2P50579 478 aaKnown RBP eCLIP18.2■□□□□ 0.5
RTN1-209ENST00000611068 APOA5Q6Q788 366 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 MMS22LQ6ZRQ5 1243 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 ANKRD20A12PQ8NF67 263 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 PSD3Q9NYI0 1048 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 CERS5Q8N5B7 392 aa18.2■□□□□ 0.5
RTN1-209ENST00000611068 KRT23Q9C075 422 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms