RNA–Protein interactions for RNA: ENST00000609933.3

LINC02028-218, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 848 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-218	ENST00000609933	PDS5A	Q29RF7	1337 aa	Known RBP	13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	BDP1	A6H8Y1	2624 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L15	C9J2P7	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L13	C9JLJ4	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L11	C9JVI0	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L18	D6R9N7	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L22	D6RA61	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L17	D6RBQ6	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L19	D6RCP7	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L20	D6RJB6	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	KIAA0355	O15063	1070 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	PQBP1	O60828	265 aa	Known RBP	13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	CNMD	O75829	334 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	GDF11	O95390	407 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	RFX5	P48382	616 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	USP17L24	Q0WX57	530 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	LRRC41	Q15345	812 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	TEX11	Q8IYF3	940 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	DHX36	Q9H2U1	1008 aa	Known RBP	13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	EMILIN3	Q9NT22	766 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	GINM1	Q9NU53	330 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	TMEM39A	Q9NV64	488 aa		13.74	□□□□□ -0.21
LINC02028-218	ENST00000609933	CIAO1	O76071	339 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	ADORA1	P30542	326 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	OLFML2B	Q68BL8	750 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	CCDC174	Q6PII3	467 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	FEZ1	Q99689	392 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	NOL10	Q9BSC4	688 aa	Known RBP	13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	LRFN3	Q9BTN0	628 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	FBXO3	Q9UK99	471 aa		13.73	□□□□□ -0.21
LINC02028-218	ENST00000609933	PBX2	P40425	430 aa		13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	JAG1	P78504	1218 aa		13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	ZYX	Q15942	572 aa	Known RBP	13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	AAK1	Q2M2I8	961 aa		13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	WDR63	Q8IWG1	891 aa		13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	PBX4	Q9BYU1	374 aa		13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	ZBTB21	Q9ULJ3	1066 aa		13.72	□□□□□ -0.21
LINC02028-218	ENST00000609933	ZBTB22	O15209	634 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	ADORA2A	P29274	412 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	ADGRE1	Q14246	886 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	FAM47A	Q5JRC9	791 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	TMEM31	Q5JXX7	168 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	SLC5A4	Q9NY91	659 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	RAI14	Q9P0K7	980 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	MSRA	Q9UJ68	235 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	PHF24	Q9UPV7	400 aa		13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	SALL2	Q9Y467	1007 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC02028-218	ENST00000609933	GRXCR1	A8MXD5	290 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	DCDC2C	A8MYV0	355 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	IGHA2	P01877	340 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	BMP1	P13497	986 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	IL15	P40933	162 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	PRAMEF19	Q5SWL8	479 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	CATSPERG	Q6ZRH7	1159 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	RNF180	Q86T96	592 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	ALYREF	Q86V81	257 aa	Known RBP	13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	MICALL1	Q8N3F8	863 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	SLC44A5	Q8NCS7	719 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	ZNF384	Q8TF68	577 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	NSUN4	Q96CB9	384 aa	Known RBP	13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	USP44	Q9H0E7	712 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	XPNPEP3	Q9NQH7	507 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933	BTBD7	Q9P203	1132 aa		13.7	□□□□□ -0.22
LINC02028-218	ENST00000609933		A0A1W2PQ45	241 aa	Predicted RBP	13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933		A0A1W2PQY0	241 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	STRN	O43815	780 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	RARB	P10826	455 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	USP14	P54578	494 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	PPIG	Q13427	754 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	RAB30	Q15771	203 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	C12orf42	Q96LP6	360 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	EPHX3	Q9H6B9	360 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	DNAJC18	Q9H819	358 aa		13.69	□□□□□ -0.22
LINC02028-218	ENST00000609933	TIMP1	P01033	207 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	TIMM10	P62072	90 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	TFF2	Q03403	129 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	FAAP100	Q0VG06	881 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	MVP	Q14764	893 aa	Known RBP	13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	SKIV2L	Q15477	1246 aa	Known RBP	13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	ATF7IP	Q6VMQ6	1270 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	LBX2	Q6XYB7	198 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	MAPKAPK5	Q8IW41	473 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	SLC28A3	Q9HAS3	691 aa		13.68	□□□□□ -0.22
LINC02028-218	ENST00000609933	CHD9	Q3L8U1	2897 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	BAG3	O95817	575 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	GH2	P01242	217 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	HLA-DOA	P06340	250 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	PLCG2	P16885	1265 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	VCAM1	P19320	739 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	KCNQ1	P51787	676 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	MFSD5	Q6N075	450 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	TBC1D9	Q6ZT07	1266 aa		13.67	□□□□□ -0.22
LINC02028-218	ENST00000609933	ANKRD33	Q7Z3H0	272 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms