RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 AOX1Q06278 1338 aa12□□□□□ -0.49
CSNK1A1-209ENST00000606299 CNTNAP4Q9C0A0 1308 aa12□□□□□ -0.49
CSNK1A1-209ENST00000606299 C21orf2O43822 256 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 SDSP20132 328 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 AACSQ86V21 672 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 ANKIB1Q9P2G1 1089 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 STAP2Q9UGK3 403 aa11.99□□□□□ -0.49
CSNK1A1-209ENST00000606299 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 CDHR2Q9BYE9 1310 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 FAM177BA6PVY3 158 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 SASH1O94885 1247 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 AMPD1P23109 780 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 LMOD1P29536 600 aaPredicted RBP11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 SNRPNP63162 240 aaKnown RBP11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 TRMT112Q9UI30 125 aaKnown RBP11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 ZNF652Q9Y2D9 606 aa11.98□□□□□ -0.49
CSNK1A1-209ENST00000606299 PIK3R2O00459 728 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 IGHA1P01876 353 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 DPYDQ12882 1025 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 HIF1AQ16665 826 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 ANKMY2Q8IV38 441 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 SYNE4Q8N205 404 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 RILPL2Q969X0 211 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 C2orf49Q9BVC5 232 aaPredicted RBP11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 AKAP11Q9UKA4 1901 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 RGPD3A6NKT7 1758 aaPredicted RBP11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 RGPD4Q7Z3J3 1758 aa11.97□□□□□ -0.49
CSNK1A1-209ENST00000606299 IRS4O14654 1257 aaPredicted RBP11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 TRIM37O94972 964 aa11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 SCG3Q8WXD2 468 aaKnown RBP11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 HCN4Q9Y3Q4 1203 aa11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.96□□□□□ -0.49
CSNK1A1-209ENST00000606299 LRP5O75197 1615 aa11.96□□□□□ -0.5
CSNK1A1-209ENST00000606299 CACNA1SQ13698 1873 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 TTC41PQ6P2S7 1318 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 CTSWP56202 376 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 TFCP2Q12800 502 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 CCDC57Q2TAC2 916 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 FCHSD1Q86WN1 690 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 BTBD6Q96KE9 485 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 C22orf23Q9BZE7 217 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 CCDC8Q9H0W5 538 aaPredicted RBP11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 KLF15Q9UIH9 416 aa11.95□□□□□ -0.5
CSNK1A1-209ENST00000606299 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 ERC2O15083 957 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 PDE8AO60658 829 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 RPS6KA4O75676 772 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 IGFBP4P22692 258 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 ALDH16A1Q8IZ83 802 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 ECHDC1Q9NTX5 307 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 TLR7Q9NYK1 1049 aaKnown RBP11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 ZNF609O15014 1411 aa11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
CSNK1A1-209ENST00000606299 EYA2O00167 538 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 RXRBP28702 533 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 DGKGP49619 791 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 IFIT5Q13325 482 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 LRRC24Q50LG9 513 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 TNNI3KQ59H18 835 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 CNTROBQ8N137 903 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 SUSD3Q96L08 255 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 GREM2Q9H772 168 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 FPGT-TNNI3KV9GXZ4 949 aa11.93□□□□□ -0.5
CSNK1A1-209ENST00000606299 ANKRD18BA2A2Z9 1011 aa11.92□□□□□ -0.5
CSNK1A1-209ENST00000606299 CIAO1O76071 339 aa11.92□□□□□ -0.5
CSNK1A1-209ENST00000606299 NTSR2O95665 410 aa11.92□□□□□ -0.5
CSNK1A1-209ENST00000606299 CSF1RP07333 972 aa11.92□□□□□ -0.5
CSNK1A1-209ENST00000606299 HCLS1P14317 486 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms