RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 PI4KBQ9UBF8 816 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 ZNF112Q9UJU3 913 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 NEDD4P46934 1319 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 ERICH2A1L162 156 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 IFIT3O14879 490 aaKnown RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 CA12O43570 354 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 KDM4AO75164 1064 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 LARGE1O95461 756 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 ZBTB48P10074 688 aaPredicted RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 CYP2D6P10635 497 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 PICALMQ13492 652 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 FOXP4Q8IVH2 680 aaPredicted RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 ZSCAN29Q8IWY8 852 aaPredicted RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 SLC10A4Q96EP9 437 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 CSADQ9Y600 493 aa12.09□□□□□ -0.47
DDX55P1-201ENST00000603334 BRCA2P51587 3418 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 FLT1P17948 1338 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 GJA5P36382 358 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 INHBEP58166 350 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 PDE4BQ07343 736 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 SART3Q15020 963 aaKnown RBP12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 SBK1Q52WX2 424 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 SH3BP5LQ7L8J4 393 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 ESR2Q92731 530 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 SAGE1Q9NXZ1 904 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 ANAPC4Q9UJX5 808 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 MYH8P13535 1937 aa12.08□□□□□ -0.48
DDX55P1-201ENST00000603334 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 DDTLA6NHG4 134 aaPredicted RBP12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 PRDM1O75626 825 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 ANTXR2P58335 489 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 NOL9Q5SY16 702 aaKnown RBP12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 SYNE3Q6ZMZ3 975 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 TTC6Q86TZ1 520 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 ZFPM1Q8IX07 1006 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 ZKSCAN3Q9BRR0 538 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 EHD4Q9H223 541 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 TACC3Q9Y6A5 838 aa12.07□□□□□ -0.48
DDX55P1-201ENST00000603334 FOCADQ5VW36 1801 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 CCDC69A6NI79 296 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 SMIM22K7EJ46 135 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 TRPA1O75762 1119 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 PCP11498 1178 aaKnown RBP12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 TM4SF4P48230 202 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 NUCB2P80303 420 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 WTAPQ15007 396 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 SPRYD7Q5W111 196 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 ZNF444Q8N0Y2 327 aaPredicted RBP12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
DDX55P1-201ENST00000603334 MANSC4A6NHS7 340 aaPredicted RBP12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 SH2B2O14492 632 aaPredicted RBP12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 SREBF2Q12772 1141 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 VGLL4Q14135 290 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 ERO1BQ86YB8 467 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 RAB11FIP4Q86YS3 637 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 DYNLL2Q96FJ2 89 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 ZNF287Q9HBT7 754 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 SIPA1L1O43166 1804 aa12.05□□□□□ -0.48
DDX55P1-201ENST00000603334 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 PFKFB2O60825 505 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 DTNBO60941 627 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 GJB2P29033 226 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 PDIA3P30101 505 aaKnown RBP12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 EVX2Q03828 476 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 PPATQ06203 517 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 MIGA2Q7L4E1 593 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 SCYL3Q8IZE3 742 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms