RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 ERICH2A1L162 156 aa22.4■■□□□ 1.18
COPE-209ENST00000599964 ECE1P42892 770 aa22.4■■□□□ 1.18
COPE-209ENST00000599964 ZNF280CQ8ND82 737 aa22.4■■□□□ 1.18
COPE-209ENST00000599964 WNK4Q96J92 1243 aa22.4■■□□□ 1.18
COPE-209ENST00000599964 JAKMIP1Q96N16 626 aaKnown RBP22.4■■□□□ 1.18
COPE-209ENST00000599964 IGKV6D-41A0A0C4DH26 115 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 TTLL1O95922 423 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 GUCY1A2P33402 732 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 SHROOM1Q2M3G4 852 aaPredicted RBP22.39■■□□□ 1.17
COPE-209ENST00000599964 SPRYD7Q5W111 196 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 RASAL3Q86YV0 1011 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 MB21D2Q8IYB1 491 aaPredicted RBP22.39■■□□□ 1.17
COPE-209ENST00000599964 CEP95Q96GE4 821 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 FEZ1Q99689 392 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 MTA3Q9BTC8 594 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.39■■□□□ 1.17
COPE-209ENST00000599964 MTMR4Q9NYA4 1195 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 NYAP2Q9P242 653 aa22.39■■□□□ 1.17
COPE-209ENST00000599964 GREB1LQ9C091 1923 aaPredicted RBP22.39■■□□□ 1.17
COPE-209ENST00000599964 SLC10A3P09131 477 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 ATP2B2Q01814 1243 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 BLOC1S2Q6QNY1 142 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 TTC14Q96N46 770 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 ZSCAN10Q96SZ4 725 aaPredicted RBP22.38■■□□□ 1.17
COPE-209ENST00000599964 TM6SF1Q9BZW5 370 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 STX8Q9UNK0 236 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 AFG3L2Q9Y4W6 797 aa22.38■■□□□ 1.17
COPE-209ENST00000599964 WDR19Q8NEZ3 1342 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 CXCL11O14625 94 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 RBM25P49756 843 aaKnown RBP22.37■■□□□ 1.17
COPE-209ENST00000599964 SPP2Q13103 211 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 ADCK5Q3MIX3 580 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 DHX32Q7L7V1 743 aaKnown RBP22.37■■□□□ 1.17
COPE-209ENST00000599964 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 TMEM87BQ96K49 555 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.37■■□□□ 1.17
COPE-209ENST00000599964 SYNPO2Q9UMS6 1093 aa22.37■■□□□ 1.17
COPE-209ENST00000599964 TRIM75PA6NK02 468 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 C19orf81C9J6K1 198 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 IFIT3O14879 490 aaKnown RBP22.36■■□□□ 1.17
COPE-209ENST00000599964 IRF6O14896 467 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 PRC1O43663 620 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 EEF2P13639 858 aaKnown RBP22.36■■□□□ 1.17
COPE-209ENST00000599964 CASTP20810 708 aaKnown RBP22.36■■□□□ 1.17
COPE-209ENST00000599964 GTF2A2P52657 109 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 USP14P54578 494 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 SNAPC2Q13487 334 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 CYB5R4Q7L1T6 521 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 CCDC84Q86UT8 332 aaPredicted RBP22.36■■□□□ 1.17
COPE-209ENST00000599964 DGKHQ86XP1 1220 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 ZKSCAN3Q9BRR0 538 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 IL17RBQ9NRM6 502 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 CLIP2Q9UDT6 1046 aa22.36■■□□□ 1.17
COPE-209ENST00000599964 TNKSO95271 1327 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 NMT2O60551 498 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 NOGQ13253 232 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 GRM1Q13255 1194 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 CYP4F22Q6NT55 531 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 CAPNS2Q96L46 248 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 KIAA1683Q9H0B3 1180 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 KCNH4Q9UQ05 1017 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 TMX2Q9Y320 296 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 CYP46A1Q9Y6A2 500 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 PHIPQ8WWQ0 1821 aa22.35■■□□□ 1.17
COPE-209ENST00000599964 MANSC4A6NHS7 340 aaPredicted RBP22.34■■□□□ 1.17
COPE-209ENST00000599964 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
COPE-209ENST00000599964 BACE1P56817 501 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 FGD1P98174 961 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 TMEM67Q5HYA8 995 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 CLEC10AQ8IUN9 316 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 TMTC2Q8N394 836 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 MKL1Q969V6 931 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 IL17RAQ96F46 866 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 ZSWIM6Q9HCJ5 1215 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 GOPCQ9HD26 462 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 TMOD4Q9NZQ9 345 aa22.34■■□□□ 1.17
COPE-209ENST00000599964 FAM155AB1AL88 458 aaPredicted RBP22.33■■□□□ 1.17
COPE-209ENST00000599964 CETPP11597 493 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 RPS6KB1P23443 525 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 GJA5P36382 358 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 NOVP48745 357 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 MKRN3Q13064 507 aaKnown RBP22.33■■□□□ 1.17
COPE-209ENST00000599964 MTMR2Q13614 643 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 WTAPQ15007 396 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 IFIT1BQ5T764 474 aaKnown RBP22.33■■□□□ 1.17
COPE-209ENST00000599964 USP17L2Q6R6M4 530 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 RUFY3Q7L099 469 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 FASTKD5Q7L8L6 764 aaKnown RBP22.33■■□□□ 1.17
COPE-209ENST00000599964 CHST3Q7LGC8 479 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 REM2Q8IYK8 340 aaPredicted RBP22.33■■□□□ 1.17
COPE-209ENST00000599964 ENAHQ8N8S7 591 aaPredicted RBP22.33■■□□□ 1.17
COPE-209ENST00000599964 ACER1Q8TDN7 264 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 TBC1D32Q96NH3 1257 aa22.33■■□□□ 1.17
COPE-209ENST00000599964 INHBEP58166 350 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 ANTXR2P58335 489 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 HTRA3P83110 453 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 SH3D19Q5HYK7 790 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 SIAH1Q8IUQ4 282 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 NKX2-3Q8TAU0 364 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms