RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 IRX6P78412 446 aaPredicted RBP27.09■■□□□ 1.93
CCDC9-204ENST00000599398 ACER1Q8TDN7 264 aa27.09■■□□□ 1.93
CCDC9-204ENST00000599398 SRRDQ9UH36 339 aa27.09■■□□□ 1.93
CCDC9-204ENST00000599398 GSG1L2A8MUP6 293 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 APPP05067 770 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 GNAT2P19087 354 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 HOXA7P31268 230 aaPredicted RBP27.08■■□□□ 1.93
CCDC9-204ENST00000599398 CDK8P49336 464 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 USP14P54578 494 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 MLLT1Q03111 559 aaPredicted RBP27.08■■□□□ 1.93
CCDC9-204ENST00000599398 FAM110CQ1W6H9 321 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 NBPF11Q86T75 865 aa27.08■■□□□ 1.93
CCDC9-204ENST00000599398 GIMAP6Q6P9H5 292 aa27.07■■□□□ 1.92
CCDC9-204ENST00000599398 TMEM179Q6ZVK1 233 aa27.07■■□□□ 1.92
CCDC9-204ENST00000599398 C16orf86Q6ZW13 317 aa27.07■■□□□ 1.92
CCDC9-204ENST00000599398 ARMC5Q96C12 935 aa27.07■■□□□ 1.92
CCDC9-204ENST00000599398 SEC62Q99442 399 aaKnown RBP27.07■■□□□ 1.92
CCDC9-204ENST00000599398 KIAA1683Q9H0B3 1180 aa27.07■■□□□ 1.92
CCDC9-204ENST00000599398 MYPNQ86TC9 1320 aa27.07■■□□□ 1.92
CCDC9-204ENST00000599398 AKR1B1P15121 316 aa27.06■■□□□ 1.92
CCDC9-204ENST00000599398 TDO2P48775 406 aa27.06■■□□□ 1.92
CCDC9-204ENST00000599398 CHD1LQ86WJ1 897 aa27.06■■□□□ 1.92
CCDC9-204ENST00000599398 RAET1EQ8TD07 263 aa27.06■■□□□ 1.92
CCDC9-204ENST00000599398 EVI5LQ96CN4 794 aa27.06■■□□□ 1.92
CCDC9-204ENST00000599398 P2RX7Q99572 595 aaKnown RBP27.06■■□□□ 1.92
CCDC9-204ENST00000599398 MINDY4BA8MYZ0 360 aa27.05■■□□□ 1.92
CCDC9-204ENST00000599398 TNPO2O14787 897 aaKnown RBP27.05■■□□□ 1.92
CCDC9-204ENST00000599398 ZMYM1Q5SVZ6 1142 aa27.05■■□□□ 1.92
CCDC9-204ENST00000599398 SH3TC2Q8TF17 1288 aa27.05■■□□□ 1.92
CCDC9-204ENST00000599398 C12orf42Q96LP6 360 aa27.05■■□□□ 1.92
CCDC9-204ENST00000599398 CCDC17Q96LX7 622 aa27.05■■□□□ 1.92
CCDC9-204ENST00000599398 KIAA0100Q14667 2235 aaKnown RBP27.05■■□□□ 1.92
CCDC9-204ENST00000599398 HERVK_113P62684 666 aa27.04■■□□□ 1.92
CCDC9-204ENST00000599398 NUCB1Q02818 461 aa27.04■■□□□ 1.92
CCDC9-204ENST00000599398 PRKCZQ05513 592 aa27.04■■□□□ 1.92
CCDC9-204ENST00000599398 SBK1Q52WX2 424 aa27.04■■□□□ 1.92
CCDC9-204ENST00000599398 STK11IPQ8N1F8 1099 aa27.04■■□□□ 1.92
CCDC9-204ENST00000599398 PATL2C9JE40 543 aaKnown RBP27.03■■□□□ 1.92
CCDC9-204ENST00000599398 DOCK3Q8IZD9 2030 aa27.03■■□□□ 1.92
CCDC9-204ENST00000599398 ZNF333Q96JL9 665 aa27.03■■□□□ 1.92
CCDC9-204ENST00000599398 EPB41L4AQ9HCS5 686 aaPredicted RBP27.03■■□□□ 1.92
CCDC9-204ENST00000599398 TRIM6-TRIM34B2RNG4 842 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L15C9J2P7 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L13C9JLJ4 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L11C9JVI0 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L18D6R9N7 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L22D6RA61 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L17D6RBQ6 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L19D6RCP7 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L20D6RJB6 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 MYCP01106 439 aaPredicted RBP27.02■■□□□ 1.92
CCDC9-204ENST00000599398 VCAM1P19320 739 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 ICA1Q05084 483 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 USP17L24Q0WX57 530 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 CLEC10AQ8IUN9 316 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 COA7Q96BR5 231 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 NACAP1Q9BZK3 213 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 GABRQQ9UN88 632 aa27.02■■□□□ 1.92
CCDC9-204ENST00000599398 A0A1W2PRG0 241 aa27.01■■□□□ 1.91
CCDC9-204ENST00000599398 IFNL3Q8IZI9 196 aa27.01■■□□□ 1.91
CCDC9-204ENST00000599398 TMEM106CQ9BVX2 250 aa27.01■■□□□ 1.91
CCDC9-204ENST00000599398 MKNK2Q9HBH9 465 aa27.01■■□□□ 1.91
CCDC9-204ENST00000599398 ARHGEF10LQ9HCE6 1279 aa27.01■■□□□ 1.91
CCDC9-204ENST00000599398 CCDC129Q6ZRS4 1044 aa27■■□□□ 1.91
CCDC9-204ENST00000599398 PAGR1Q9BTK6 254 aa27■■□□□ 1.91
CCDC9-204ENST00000599398 MORF4L1Q9UBU8 362 aa27■■□□□ 1.91
CCDC9-204ENST00000599398 PEX10O60683 326 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 GRK4P32298 578 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 FLT3LGP49771 235 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 ATP2B2Q01814 1243 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 CATSPERGQ6ZRH7 1159 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 GPRC5AQ8NFJ5 357 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 GTF3C2Q8WUA4 911 aaPredicted RBP26.99■■□□□ 1.91
CCDC9-204ENST00000599398 RILPL2Q969X0 211 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 NAPBQ9H115 298 aa26.99■■□□□ 1.91
CCDC9-204ENST00000599398 RPAP3Q9H6T3 665 aaPredicted RBP26.99■■□□□ 1.91
CCDC9-204ENST00000599398 BIN2Q9UBW5 565 aaPredicted RBP26.99■■□□□ 1.91
CCDC9-204ENST00000599398 POTEFA5A3E0 1075 aa26.98■■□□□ 1.91
CCDC9-204ENST00000599398 PLEKHM2Q8IWE5 1019 aa26.98■■□□□ 1.91
CCDC9-204ENST00000599398 SH2D4AQ9H788 454 aa26.98■■□□□ 1.91
CCDC9-204ENST00000599398 TXNRD2Q9NNW7 524 aa26.98■■□□□ 1.91
CCDC9-204ENST00000599398 ROBO3Q96MS0 1386 aa26.97■■□□□ 1.91
CCDC9-204ENST00000599398 KANSL2Q9H9L4 492 aa26.97■■□□□ 1.91
CCDC9-204ENST00000599398 RBPJLQ9UBG7 517 aa26.97■■□□□ 1.91
CCDC9-204ENST00000599398 RASA1P20936 1047 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 ERVK-9P63128 1117 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 ERVK-24P63145 666 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 SIAH1Q8IUQ4 282 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 CCAR1Q8IX12 1150 aaKnown RBP26.96■■□□□ 1.91
CCDC9-204ENST00000599398 TANGO6Q9C0B7 1094 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 ZNF287Q9HBT7 754 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 HELLSQ9NRZ9 838 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 TMX2Q9Y320 296 aa26.96■■□□□ 1.91
CCDC9-204ENST00000599398 RBBP6Q7Z6E9 1792 aaKnown RBP26.95■■□□□ 1.9
CCDC9-204ENST00000599398 ADCY3O60266 1144 aa26.95■■□□□ 1.9
CCDC9-204ENST00000599398 EEF2P13639 858 aaKnown RBP26.95■■□□□ 1.9
CCDC9-204ENST00000599398 SLAIN1Q8ND83 568 aa26.95■■□□□ 1.9
CCDC9-204ENST00000599398 PRDM1O75626 825 aa26.94■■□□□ 1.9
CCDC9-204ENST00000599398 ZNF444Q8N0Y2 327 aaPredicted RBP26.94■■□□□ 1.9
CCDC9-204ENST00000599398 SPICE1Q8N0Z3 855 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms