RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 CCDC17Q96LX7 622 aa22.94■■□□□ 1.26
HOMER3-209ENST00000596482 ASCC2Q9H1I8 757 aaPredicted RBP22.94■■□□□ 1.26
HOMER3-209ENST00000596482 ZSWIM8A7E2V4 1837 aa22.94■■□□□ 1.26
HOMER3-209ENST00000596482 MINDY4BA8MYZ0 360 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 PATL2C9JE40 543 aaKnown RBP22.93■■□□□ 1.26
HOMER3-209ENST00000596482 FMNL1O95466 1100 aaPredicted RBP22.93■■□□□ 1.26
HOMER3-209ENST00000596482 AKR1B1P15121 316 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 GUCY1A2P33402 732 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 PSMC4P43686 418 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 GCLCP48506 637 aaPredicted RBP22.93■■□□□ 1.26
HOMER3-209ENST00000596482 FCGRTP55899 365 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 CAP1Q01518 475 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 TICAM2Q86XR7 235 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 C12orf42Q96LP6 360 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 KIAA1683Q9H0B3 1180 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 NAPBQ9H115 298 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 OSBPL3Q9H4L5 887 aa22.93■■□□□ 1.26
HOMER3-209ENST00000596482 ICA1Q05084 483 aa22.92■■□□□ 1.26
HOMER3-209ENST00000596482 FAM110CQ1W6H9 321 aa22.92■■□□□ 1.26
HOMER3-209ENST00000596482 ANKRD13CQ8N6S4 541 aa22.92■■□□□ 1.26
HOMER3-209ENST00000596482 EMILIN3Q9NT22 766 aa22.92■■□□□ 1.26
HOMER3-209ENST00000596482 SMIM22K7EJ46 135 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 HOXD10P28358 340 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 HOXA7P31268 230 aaPredicted RBP22.91■■□□□ 1.26
HOMER3-209ENST00000596482 PRMT2P55345 433 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 IFNL3Q8IZI9 196 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 ACER1Q8TDN7 264 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 SH2D4AQ9H788 454 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 ZNF287Q9HBT7 754 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 ARHGEF10LQ9HCE6 1279 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 HELLSQ9NRZ9 838 aa22.91■■□□□ 1.26
HOMER3-209ENST00000596482 CCDC129Q6ZRS4 1044 aa22.9■■□□□ 1.26
HOMER3-209ENST00000596482 GTF3C2Q8WUA4 911 aaPredicted RBP22.9■■□□□ 1.26
HOMER3-209ENST00000596482 TRIM47Q96LD4 638 aa22.9■■□□□ 1.26
HOMER3-209ENST00000596482 MKNK2Q9HBH9 465 aa22.9■■□□□ 1.26
HOMER3-209ENST00000596482 PTCH2Q9Y6C5 1203 aa22.9■■□□□ 1.26
HOMER3-209ENST00000596482 VCAM1P19320 739 aa22.89■■□□□ 1.25
HOMER3-209ENST00000596482 STK11IPQ8N1F8 1099 aa22.89■■□□□ 1.25
HOMER3-209ENST00000596482 MYPNQ86TC9 1320 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 A0A0D9SFI3 127 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 SLC3A2P08195 630 aaKnown RBP22.88■■□□□ 1.25
HOMER3-209ENST00000596482 CTGFP29279 349 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 HERVK_113P62684 666 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 SLC9C1Q4G0N8 1177 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 FAM227BQ96M60 508 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 SRRDQ9UH36 339 aa22.88■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L15C9J2P7 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L13C9JLJ4 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L11C9JVI0 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L18D6R9N7 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L22D6RA61 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L17D6RBQ6 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L19D6RCP7 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L20D6RJB6 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 TNPO2O14787 897 aaKnown RBP22.87■■□□□ 1.25
HOMER3-209ENST00000596482 SOX10P56693 466 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 USP17L24Q0WX57 530 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 NMIQ13287 307 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-209ENST00000596482 MCMDC2Q4G0Z9 681 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 CLEC10AQ8IUN9 316 aa22.87■■□□□ 1.25
HOMER3-209ENST00000596482 ATP2B2Q01814 1243 aa22.86■■□□□ 1.25
HOMER3-209ENST00000596482 PPARAQ07869 468 aa22.86■■□□□ 1.25
HOMER3-209ENST00000596482 RAET1EQ8TD07 263 aa22.86■■□□□ 1.25
HOMER3-209ENST00000596482 P2RX7Q99572 595 aaKnown RBP22.86■■□□□ 1.25
HOMER3-209ENST00000596482 RPAP3Q9H6T3 665 aaPredicted RBP22.86■■□□□ 1.25
HOMER3-209ENST00000596482 KANSL2Q9H9L4 492 aa22.86■■□□□ 1.25
HOMER3-209ENST00000596482 DIAPH3Q9NSV4 1193 aa22.86■■□□□ 1.25
HOMER3-209ENST00000596482 MGAMO43451 1857 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 A0A1W2PRG0 241 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 HIP1O00291 1037 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 RASA1P20936 1047 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 MFAP1P55081 439 aaKnown RBP22.85■■□□□ 1.25
HOMER3-209ENST00000596482 PDE4BQ07343 736 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 NBPF11Q86T75 865 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 LPAR1Q92633 364 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 ARMC5Q96C12 935 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 MORF4L1Q9UBU8 362 aa22.85■■□□□ 1.25
HOMER3-209ENST00000596482 CCDC171Q6TFL3 1326 aa22.84■■□□□ 1.25
HOMER3-209ENST00000596482 SDSP20132 328 aa22.84■■□□□ 1.25
HOMER3-209ENST00000596482 PDE4AP27815 886 aa22.84■■□□□ 1.25
HOMER3-209ENST00000596482 PRKCZQ05513 592 aa22.84■■□□□ 1.25
HOMER3-209ENST00000596482 ZNF444Q8N0Y2 327 aaPredicted RBP22.84■■□□□ 1.25
HOMER3-209ENST00000596482 COA7Q96BR5 231 aa22.84■■□□□ 1.25
HOMER3-209ENST00000596482 TANGO6Q9C0B7 1094 aa22.84■■□□□ 1.25
HOMER3-209ENST00000596482 GREB1LQ9C091 1923 aaPredicted RBP22.83■■□□□ 1.25
HOMER3-209ENST00000596482 PRDM1O75626 825 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 EEF2P13639 858 aaKnown RBP22.83■■□□□ 1.25
HOMER3-209ENST00000596482 VPS53Q5VIR6 699 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 CATSPERGQ6ZRH7 1159 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 GPRC5AQ8NFJ5 357 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 PAGR1Q9BTK6 254 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 VCPKMTQ9H867 229 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 TMX2Q9Y320 296 aa22.83■■□□□ 1.25
HOMER3-209ENST00000596482 FOXP2O15409 715 aa22.82■■□□□ 1.24
HOMER3-209ENST00000596482 TTC22Q5TAA0 569 aa22.82■■□□□ 1.24
HOMER3-209ENST00000596482 GOPCQ9HD26 462 aa22.82■■□□□ 1.24
HOMER3-209ENST00000596482 ZNF589Q86UQ0 364 aaPredicted RBP22.81■■□□□ 1.24
HOMER3-209ENST00000596482 CCAR1Q8IX12 1150 aaKnown RBP22.81■■□□□ 1.24
HOMER3-209ENST00000596482 ZMYM6O95789 1325 aa22.81■■□□□ 1.24
HOMER3-209ENST00000596482 PLIN4Q96Q06 1357 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms