RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 TJAP1Q5JTD0 557 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 USP17L2Q6R6M4 530 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 SLC39A5Q6ZMH5 540 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 MAPKAPK5Q8IW41 473 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 CRACR2BQ8N4Y2 399 aaPredicted RBP10.47□□□□□ -0.73
SMG9-202ENST00000594081 USP38Q8NB14 1042 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 NPLOC4Q8TAT6 608 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 NOL10Q9BSC4 688 aaKnown RBP10.47□□□□□ -0.73
SMG9-202ENST00000594081 GINM1Q9NU53 330 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMG9-202ENST00000594081 AKAP2Q9Y2D5 859 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 IVNS1ABPQ9Y6Y0 642 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 ZNF521Q96K83 1311 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 MYO5AQ9Y4I1 1855 aaKnown RBP10.47□□□□□ -0.73
SMG9-202ENST00000594081 MYH1P12882 1939 aa10.46□□□□□ -0.73
SMG9-202ENST00000594081 ARID4AP29374 1257 aaPredicted RBP10.46□□□□□ -0.73
SMG9-202ENST00000594081 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.73
SMG9-202ENST00000594081 METTL16Q86W50 562 aaKnown RBP10.46□□□□□ -0.73
SMG9-202ENST00000594081 C12orf42Q96LP6 360 aa10.46□□□□□ -0.73
SMG9-202ENST00000594081 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.73
SMG9-202ENST00000594081 FEZ1Q99689 392 aa10.46□□□□□ -0.73
SMG9-202ENST00000594081 RAPGEFL1Q9UHV5 662 aa10.46□□□□□ -0.73
SMG9-202ENST00000594081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.46□□□□□ -0.73
SMG9-202ENST00000594081 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 IGHA2P01877 340 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
SMG9-202ENST00000594081 PLCG2P16885 1265 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 VCAM1P19320 739 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 MCAMP43121 646 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 ANO1Q5XXA6 986 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 ARRDC4Q8NCT1 418 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
SMG9-202ENST00000594081 NEUROD6Q96NK8 337 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 BTBD7Q9P203 1132 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 PALD1Q9ULE6 856 aa10.45□□□□□ -0.74
SMG9-202ENST00000594081 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
SMG9-202ENST00000594081 BAG3O95817 575 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 GH2P01242 217 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 HLA-DOAP06340 250 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 DNAJB2P25686 324 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 GRIN2CQ14957 1233 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 GORABQ5T7V8 394 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 OLFML2BQ68BL8 750 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 NAA16Q6N069 864 aaPredicted RBP10.44□□□□□ -0.74
SMG9-202ENST00000594081 LBX2Q6XYB7 198 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 ADGRA1Q86SQ6 560 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 FOXP4Q8IVH2 680 aaPredicted RBP10.44□□□□□ -0.74
SMG9-202ENST00000594081 MEIS3Q99687 375 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 SMC4Q9NTJ3 1288 aa10.44□□□□□ -0.74
SMG9-202ENST00000594081 SAP30BPQ9UHR5 308 aaKnown RBP10.44□□□□□ -0.74
SMG9-202ENST00000594081 NAV1Q8NEY1 1877 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 SEPT4O43236 478 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 SRGAP3O43295 1099 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 ITGB8P26012 769 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 ADORA2AP29274 412 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 PLA2G5P39877 138 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 ADCYAP1R1P41586 468 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 USP14P54578 494 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 EPHB4P54760 987 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 FAM47AQ5JRC9 791 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 C1orf53Q5VUE5 145 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 CATSPERGQ6ZRH7 1159 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 FERMT2Q96AC1 680 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 HDAC5Q9UQL6 1122 aa10.43□□□□□ -0.74
SMG9-202ENST00000594081 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 CLTBP09497 229 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 PPP4CP60510 307 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 LRRC41Q15345 812 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 ATF7IPQ6VMQ6 1270 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 DPP9Q86TI2 863 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 KIAA1683Q9H0B3 1180 aa10.42□□□□□ -0.74
SMG9-202ENST00000594081 RPAP3Q9H6T3 665 aaPredicted RBP10.42□□□□□ -0.74
SMG9-202ENST00000594081 E9PSI1 815 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 TLE2Q04725 743 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 FPGSQ05932 587 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 MTX1Q13505 466 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 RAB3GAP1Q15042 981 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 TATDN1Q6P1N9 297 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 ACER1Q8TDN7 264 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 MOV10L1Q9BXT6 1211 aaKnown RBP10.41□□□□□ -0.74
SMG9-202ENST00000594081 ZNF576Q9H609 170 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 THEGQ9P2T0 379 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 PHF24Q9UPV7 400 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 TACC3Q9Y6A5 838 aa10.41□□□□□ -0.74
SMG9-202ENST00000594081 ROBO3Q96MS0 1386 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms