RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 HOXA7P31268 230 aaPredicted RBP26.76■■□□□ 1.87
MBD3-208ENST00000590830 ZYXQ15942 572 aaKnown RBP26.76■■□□□ 1.87
MBD3-208ENST00000590830 FAM227BQ96M60 508 aa26.76■■□□□ 1.87
MBD3-208ENST00000590830 KIAA1683Q9H0B3 1180 aa26.76■■□□□ 1.87
MBD3-208ENST00000590830 HTTP42858 3142 aa26.76■■□□□ 1.87
MBD3-208ENST00000590830 TRIM6-TRIM34B2RNG4 842 aa26.75■■□□□ 1.87
MBD3-208ENST00000590830 PSMC4P43686 418 aa26.75■■□□□ 1.87
MBD3-208ENST00000590830 PABPC4Q13310 644 aaKnown RBP eCLIP26.75■■□□□ 1.877e-9■□□□□ 10.8
MBD3-208ENST00000590830 TMEM179Q6ZVK1 233 aa26.75■■□□□ 1.87
MBD3-208ENST00000590830 STK11IPQ8N1F8 1099 aa26.75■■□□□ 1.87
MBD3-208ENST00000590830 SMCR8Q8TEV9 937 aaPredicted RBP26.75■■□□□ 1.87
MBD3-208ENST00000590830 C12orf42Q96LP6 360 aa26.75■■□□□ 1.87
MBD3-208ENST00000590830 P2RX7Q99572 595 aaKnown RBP26.75■■□□□ 1.87
MBD3-208ENST00000590830 PNMA3Q9UL41 463 aa26.75■■□□□ 1.87
MBD3-208ENST00000590830 ZSWIM8A7E2V4 1837 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 OSBPP22059 807 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 TDO2P48775 406 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 KIF22Q14807 665 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 CLEC10AQ8IUN9 316 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 ANKRD13CQ8N6S4 541 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 RILPL2Q969X0 211 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 CCDC17Q96LX7 622 aa26.74■■□□□ 1.87
MBD3-208ENST00000590830 A0A0D9SFI3 127 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 ARHGEF6Q15052 776 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 VPS53Q5VIR6 699 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 POTEEQ6S8J3 1075 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 TICAM2Q86XR7 235 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 FEZ1Q99689 392 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.73■■□□□ 1.87
MBD3-208ENST00000590830 HELLSQ9NRZ9 838 aa26.73■■□□□ 1.87
MBD3-208ENST00000590830 NMIQ13287 307 aaPredicted RBP26.72■■□□□ 1.87
MBD3-208ENST00000590830 PTCH2Q9Y6C5 1203 aa26.72■■□□□ 1.87
MBD3-208ENST00000590830 ROBO3Q96MS0 1386 aa26.71■■□□□ 1.87
MBD3-208ENST00000590830 PEX10O60683 326 aa26.71■■□□□ 1.87
MBD3-208ENST00000590830 FMNL1O95466 1100 aaPredicted RBP26.71■■□□□ 1.87
MBD3-208ENST00000590830 RASA1P20936 1047 aa26.71■■□□□ 1.87
MBD3-208ENST00000590830 USP14P54578 494 aa26.71■■□□□ 1.87
MBD3-208ENST00000590830 KIAA1755Q5JYT7 1200 aa26.71■■□□□ 1.87
MBD3-208ENST00000590830 NACAP1Q9BZK3 213 aa26.71■■□□□ 1.87
MBD3-208ENST00000590830 GNRH1P01148 92 aa26.7■■□□□ 1.86
MBD3-208ENST00000590830 SDSP20132 328 aa26.7■■□□□ 1.86
MBD3-208ENST00000590830 GCLCP48506 637 aaPredicted RBP26.7■■□□□ 1.86
MBD3-208ENST00000590830 MCMDC2Q4G0Z9 681 aa26.7■■□□□ 1.86
MBD3-208ENST00000590830 VCAM1P19320 739 aa26.69■■□□□ 1.86
MBD3-208ENST00000590830 HERVK_113P62684 666 aa26.69■■□□□ 1.86
MBD3-208ENST00000590830 IRX3P78415 501 aaPredicted RBP26.69■■□□□ 1.86
MBD3-208ENST00000590830 SRRDQ9UH36 339 aa26.69■■□□□ 1.86
MBD3-208ENST00000590830 FAM110CQ1W6H9 321 aa26.68■■□□□ 1.86
MBD3-208ENST00000590830 CATSPERGQ6ZRH7 1159 aa26.68■■□□□ 1.86
MBD3-208ENST00000590830 ZNF589Q86UQ0 364 aaPredicted RBP26.68■■□□□ 1.86
MBD3-208ENST00000590830 NAPBQ9H115 298 aa26.68■■□□□ 1.86
MBD3-208ENST00000590830 MKNK2Q9HBH9 465 aa26.68■■□□□ 1.86
MBD3-208ENST00000590830 TXNRD2Q9NNW7 524 aa26.68■■□□□ 1.86
MBD3-208ENST00000590830 RBPJLQ9UBG7 517 aa26.68■■□□□ 1.86
MBD3-208ENST00000590830 USP17L15C9J2P7 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L13C9JLJ4 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L11C9JVI0 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L18D6R9N7 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L22D6RA61 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L17D6RBQ6 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L19D6RCP7 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L20D6RJB6 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 PRDM1O75626 825 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 FCGRTP55899 365 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 ICA1Q05084 483 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 USP17L24Q0WX57 530 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 MORF4L1Q9UBU8 362 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 TMX2Q9Y320 296 aa26.67■■□□□ 1.86
MBD3-208ENST00000590830 EEF2P13639 858 aaKnown RBP26.66■■□□□ 1.86
MBD3-208ENST00000590830 SOX10P56693 466 aa26.66■■□□□ 1.86
MBD3-208ENST00000590830 PPARAQ07869 468 aa26.66■■□□□ 1.86
MBD3-208ENST00000590830 ARMC5Q96C12 935 aa26.66■■□□□ 1.86
MBD3-208ENST00000590830 RPAP3Q9H6T3 665 aaPredicted RBP26.66■■□□□ 1.86
MBD3-208ENST00000590830 KANSL2Q9H9L4 492 aa26.66■■□□□ 1.86
MBD3-208ENST00000590830 GABRQQ9UN88 632 aa26.66■■□□□ 1.86
MBD3-208ENST00000590830 TACC3Q9Y6A5 838 aa26.66■■□□□ 1.86
MBD3-208ENST00000590830 GSPT1P15170 499 aaKnown RBP26.65■■□□□ 1.86
MBD3-208ENST00000590830 RGS19P49795 217 aa26.65■■□□□ 1.86
MBD3-208ENST00000590830 PRMT2P55345 433 aa26.65■■□□□ 1.86
MBD3-208ENST00000590830 ALX1Q15699 326 aa26.65■■□□□ 1.86
MBD3-208ENST00000590830 Q3C1V9 767 aa26.65■■□□□ 1.86
MBD3-208ENST00000590830 INCENPQ9NQS7 918 aa26.65■■□□□ 1.86
MBD3-208ENST00000590830 HOXD10P28358 340 aa26.64■■□□□ 1.86
MBD3-208ENST00000590830 PRKCZQ05513 592 aa26.64■■□□□ 1.86
MBD3-208ENST00000590830 ARHGEF10LQ9HCE6 1279 aa26.64■■□□□ 1.86
MBD3-208ENST00000590830 CENPFP49454 3210 aa26.63■■□□□ 1.85
MBD3-208ENST00000590830 IGKV6D-41A0A0C4DH26 115 aa26.63■■□□□ 1.85
MBD3-208ENST00000590830 FGAP02671 866 aa26.63■■□□□ 1.85
MBD3-208ENST00000590830 HSPD1P10809 573 aaKnown RBP26.63■■□□□ 1.85
MBD3-208ENST00000590830 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
MBD3-208ENST00000590830 ZNF444Q8N0Y2 327 aaPredicted RBP26.63■■□□□ 1.85
MBD3-208ENST00000590830 VCPKMTQ9H867 229 aa26.63■■□□□ 1.85
MBD3-208ENST00000590830 MYPNQ86TC9 1320 aa26.63■■□□□ 1.85
MBD3-208ENST00000590830 TNPO2O14787 897 aaKnown RBP26.62■■□□□ 1.85
MBD3-208ENST00000590830 CNMDO75829 334 aa26.62■■□□□ 1.85
MBD3-208ENST00000590830 ATP2B2Q01814 1243 aa26.62■■□□□ 1.85
MBD3-208ENST00000590830 CTDSPL2Q05D32 466 aa26.62■■□□□ 1.85
MBD3-208ENST00000590830 SPICE1Q8N0Z3 855 aa26.62■■□□□ 1.85
MBD3-208ENST00000590830 SH3TC2Q8TF17 1288 aa26.62■■□□□ 1.85
MBD3-208ENST00000590830 CCDC171Q6TFL3 1326 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms