RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 TMOD4Q9NZQ9 345 aa25.65■■□□□ 1.7
LRP3-202ENST00000590275 GABRQQ9UN88 632 aa25.65■■□□□ 1.7
LRP3-202ENST00000590275 KIF22Q14807 665 aa25.64■■□□□ 1.7
LRP3-202ENST00000590275 SBK1Q52WX2 424 aa25.64■■□□□ 1.7
LRP3-202ENST00000590275 USP17L2Q6R6M4 530 aa25.64■■□□□ 1.7
LRP3-202ENST00000590275 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.64■■□□□ 1.7
LRP3-202ENST00000590275 KIAA1683Q9H0B3 1180 aa25.64■■□□□ 1.7
LRP3-202ENST00000590275 SRRDQ9UH36 339 aa25.64■■□□□ 1.7
LRP3-202ENST00000590275 SWAP70Q9UH65 585 aa25.64■■□□□ 1.7
LRP3-202ENST00000590275 MPHOSPH10O00566 681 aaKnown RBP25.63■■□□□ 1.69
LRP3-202ENST00000590275 FMNL1O95466 1100 aaPredicted RBP25.63■■□□□ 1.69
LRP3-202ENST00000590275 PRKCZQ05513 592 aa25.63■■□□□ 1.69
LRP3-202ENST00000590275 STK11IPQ8N1F8 1099 aa25.63■■□□□ 1.69
LRP3-202ENST00000590275 SH3TC2Q8TF17 1288 aa25.63■■□□□ 1.69
LRP3-202ENST00000590275 CABP5Q9NP86 173 aa25.63■■□□□ 1.69
LRP3-202ENST00000590275 POTEFA5A3E0 1075 aa25.62■■□□□ 1.69
LRP3-202ENST00000590275 ZBTB47Q9UFB7 747 aaPredicted RBP25.62■■□□□ 1.69
LRP3-202ENST00000590275 PNMA3Q9UL41 463 aa25.62■■□□□ 1.69
LRP3-202ENST00000590275 PATL2C9JE40 543 aaKnown RBP25.61■■□□□ 1.69
LRP3-202ENST00000590275 VCAM1P19320 739 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 PDE4AP27815 886 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 HERVK_113P62684 666 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 FAM110CQ1W6H9 321 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 GIMAP6Q6P9H5 292 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 EVI5LQ96CN4 794 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 ZNF333Q96JL9 665 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 RBPJLQ9UBG7 517 aa25.61■■□□□ 1.69
LRP3-202ENST00000590275 ARPP21Q9UBL0 812 aaPredicted RBP25.61■■□□□ 1.69
LRP3-202ENST00000590275 MKI67P46013 3256 aaKnown RBP25.61■■□□□ 1.69
LRP3-202ENST00000590275 PABPC4Q13310 644 aaKnown RBP eCLIP25.6■■□□□ 1.69
LRP3-202ENST00000590275 ARHGEF6Q15052 776 aa25.6■■□□□ 1.69
LRP3-202ENST00000590275 VPS53Q5VIR6 699 aa25.6■■□□□ 1.69
LRP3-202ENST00000590275 TMEM179Q6ZVK1 233 aa25.6■■□□□ 1.69
LRP3-202ENST00000590275 IFNL3Q8IZI9 196 aa25.6■■□□□ 1.69
LRP3-202ENST00000590275 FAM227BQ96M60 508 aa25.6■■□□□ 1.69
LRP3-202ENST00000590275 FEZ1Q99689 392 aa25.6■■□□□ 1.69
LRP3-202ENST00000590275 ROBO3Q96MS0 1386 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 MINDY4BA8MYZ0 360 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 TNRC18O15417 2968 aaPredicted RBP25.59■■□□□ 1.69
LRP3-202ENST00000590275 GNRH1P01148 92 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 RASA1P20936 1047 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 FCGRTP55899 365 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 Q3C1V9 767 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 MORF4L1Q9UBU8 362 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 TACC3Q9Y6A5 838 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 MYPNQ86TC9 1320 aa25.59■■□□□ 1.69
LRP3-202ENST00000590275 A0A0D9SFI3 127 aa25.58■■□□□ 1.69
LRP3-202ENST00000590275 CNMDO75829 334 aa25.58■■□□□ 1.69
LRP3-202ENST00000590275 MYCP01106 439 aaPredicted RBP25.58■■□□□ 1.69
LRP3-202ENST00000590275 GCLCP48506 637 aaPredicted RBP25.58■■□□□ 1.69
LRP3-202ENST00000590275 IRX3P78415 501 aaPredicted RBP25.58■■□□□ 1.69
LRP3-202ENST00000590275 DDRGK1Q96HY6 314 aa25.58■■□□□ 1.69
LRP3-202ENST00000590275 OSBPL3Q9H4L5 887 aa25.58■■□□□ 1.69
LRP3-202ENST00000590275 SLC9C1Q4G0N8 1177 aa25.57■■□□□ 1.68
LRP3-202ENST00000590275 CATSPERGQ6ZRH7 1159 aa25.57■■□□□ 1.68
LRP3-202ENST00000590275 TAOK2Q9UL54 1235 aa25.57■■□□□ 1.68
LRP3-202ENST00000590275 APPP05067 770 aa25.56■■□□□ 1.68
LRP3-202ENST00000590275 GNAT2P19087 354 aa25.56■■□□□ 1.68
LRP3-202ENST00000590275 TDO2P48775 406 aa25.56■■□□□ 1.68
LRP3-202ENST00000590275 FLT3LGP49771 235 aa25.56■■□□□ 1.68
LRP3-202ENST00000590275 USP14P54578 494 aa25.56■■□□□ 1.68
LRP3-202ENST00000590275 LRRFIP1Q32MZ4 808 aaKnown RBP25.56■■□□□ 1.68
LRP3-202ENST00000590275 CCDC17Q96LX7 622 aa25.56■■□□□ 1.68
LRP3-202ENST00000590275 RPAP3Q9H6T3 665 aaPredicted RBP25.56■■□□□ 1.68
LRP3-202ENST00000590275 USP17L15C9J2P7 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L13C9JLJ4 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L11C9JVI0 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L18D6R9N7 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L22D6RA61 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L17D6RBQ6 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L19D6RCP7 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L20D6RJB6 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 TNPO2O14787 897 aaKnown RBP25.55■■□□□ 1.68
LRP3-202ENST00000590275 PRDM1O75626 825 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 PRMT2P55345 433 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 ICA1Q05084 483 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 USP17L24Q0WX57 530 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 MTFR1Q15390 333 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 ZNF589Q86UQ0 364 aaPredicted RBP25.55■■□□□ 1.68
LRP3-202ENST00000590275 AMOTL1Q8IY63 956 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 INCENPQ9NQS7 918 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 TMX2Q9Y320 296 aa25.55■■□□□ 1.68
LRP3-202ENST00000590275 EEF2P13639 858 aaKnown RBP25.54■■□□□ 1.68
LRP3-202ENST00000590275 MLLT1Q03111 559 aaPredicted RBP25.54■■□□□ 1.68
LRP3-202ENST00000590275 NMIQ13287 307 aaPredicted RBP25.54■■□□□ 1.68
LRP3-202ENST00000590275 PORCNQ9H237 461 aa25.54■■□□□ 1.68
LRP3-202ENST00000590275 GJD2Q9UKL4 321 aa25.54■■□□□ 1.68
LRP3-202ENST00000590275 HOXD10P28358 340 aa25.53■■□□□ 1.68
LRP3-202ENST00000590275 SPICE1Q8N0Z3 855 aa25.53■■□□□ 1.68
LRP3-202ENST00000590275 RAET1EQ8TD07 263 aa25.53■■□□□ 1.68
LRP3-202ENST00000590275 RILPL2Q969X0 211 aa25.53■■□□□ 1.68
LRP3-202ENST00000590275 BTBD7Q9P203 1132 aa25.53■■□□□ 1.68
LRP3-202ENST00000590275 MGAMO43451 1857 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 IGKV6D-41A0A0C4DH26 115 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 SPDYE16A6NNV3 312 aaPredicted RBP25.52■■□□□ 1.68
LRP3-202ENST00000590275 TRIM6-TRIM34B2RNG4 842 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 ELNP15502 786 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 EN2P19622 333 aaPredicted RBP25.52■■□□□ 1.68
LRP3-202ENST00000590275 GRK4P32298 578 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 ERVK-9P63128 1117 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms