RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 FBXO46Q6PJ61 603 aaPredicted RBP23.75■■□□□ 1.39
LINC00654-202ENST00000589201 USP17L2Q6R6M4 530 aa23.75■■□□□ 1.39
LINC00654-202ENST00000589201 TMEM179Q6ZVK1 233 aa23.75■■□□□ 1.39
LINC00654-202ENST00000589201 SMCR8Q8TEV9 937 aaPredicted RBP23.75■■□□□ 1.39
LINC00654-202ENST00000589201 CCDC17Q96LX7 622 aa23.75■■□□□ 1.39
LINC00654-202ENST00000589201 FEZ1Q99689 392 aa23.75■■□□□ 1.39
LINC00654-202ENST00000589201 PNMA3Q9UL41 463 aa23.75■■□□□ 1.39
LINC00654-202ENST00000589201 A0A0D9SFI3 127 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 CCDC85CA6NKD9 419 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 FOXP2O15409 715 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 OSBPP22059 807 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 NMIQ13287 307 aaPredicted RBP23.74■■□□□ 1.39
LINC00654-202ENST00000589201 KIF22Q14807 665 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 MCMDC2Q4G0Z9 681 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 KIAA1683Q9H0B3 1180 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 ASCC2Q9H1I8 757 aaPredicted RBP23.74■■□□□ 1.39
LINC00654-202ENST00000589201 HPS5Q9UPZ3 1129 aa23.74■■□□□ 1.39
LINC00654-202ENST00000589201 SDSP20132 328 aa23.73■■□□□ 1.39
LINC00654-202ENST00000589201 CTGFP29279 349 aa23.73■■□□□ 1.39
LINC00654-202ENST00000589201 HOXA7P31268 230 aaPredicted RBP23.73■■□□□ 1.39
LINC00654-202ENST00000589201 ARHGEF6Q15052 776 aa23.73■■□□□ 1.39
LINC00654-202ENST00000589201 VPS53Q5VIR6 699 aa23.73■■□□□ 1.39
LINC00654-202ENST00000589201 NAPBQ9H115 298 aa23.73■■□□□ 1.39
LINC00654-202ENST00000589201 PTPN22Q9Y2R2 807 aa23.73■■□□□ 1.39
LINC00654-202ENST00000589201 A0A1W2PRG0 241 aa23.72■■□□□ 1.39
LINC00654-202ENST00000589201 CLEC10AQ8IUN9 316 aa23.72■■□□□ 1.39
LINC00654-202ENST00000589201 SIAH1Q8IUQ4 282 aa23.72■■□□□ 1.39
LINC00654-202ENST00000589201 C12orf42Q96LP6 360 aa23.72■■□□□ 1.39
LINC00654-202ENST00000589201 MKNK2Q9HBH9 465 aa23.72■■□□□ 1.39
LINC00654-202ENST00000589201 ZSWIM8A7E2V4 1837 aa23.72■■□□□ 1.39
LINC00654-202ENST00000589201 ROBO3Q96MS0 1386 aa23.71■■□□□ 1.39
LINC00654-202ENST00000589201 PSMC4P43686 418 aa23.71■■□□□ 1.39
LINC00654-202ENST00000589201 USP14P54578 494 aa23.71■■□□□ 1.39
LINC00654-202ENST00000589201 ANKRD13CQ8N6S4 541 aa23.71■■□□□ 1.39
LINC00654-202ENST00000589201 P2RX7Q99572 595 aaKnown RBP23.71■■□□□ 1.39
LINC00654-202ENST00000589201 RASA1P20936 1047 aa23.7■■□□□ 1.38
LINC00654-202ENST00000589201 IRX3P78415 501 aaPredicted RBP23.7■■□□□ 1.38
LINC00654-202ENST00000589201 ZNF589Q86UQ0 364 aaPredicted RBP23.7■■□□□ 1.38
LINC00654-202ENST00000589201 TRIM47Q96LD4 638 aa23.7■■□□□ 1.38
LINC00654-202ENST00000589201 HTTP42858 3142 aa23.7■■□□□ 1.38
LINC00654-202ENST00000589201 FMNL1O95466 1100 aaPredicted RBP23.69■■□□□ 1.38
LINC00654-202ENST00000589201 GCLCP48506 637 aaPredicted RBP23.69■■□□□ 1.38
LINC00654-202ENST00000589201 PPARAQ07869 468 aa23.69■■□□□ 1.38
LINC00654-202ENST00000589201 TTC22Q5TAA0 569 aa23.69■■□□□ 1.38
LINC00654-202ENST00000589201 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.69■■□□□ 1.38
LINC00654-202ENST00000589201 PRDM1O75626 825 aa23.68■■□□□ 1.38
LINC00654-202ENST00000589201 GSPT1P15170 499 aaKnown RBP23.68■■□□□ 1.38
LINC00654-202ENST00000589201 ICA1Q05084 483 aa23.68■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L15C9J2P7 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L13C9JLJ4 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L11C9JVI0 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L18D6R9N7 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L22D6RA61 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L17D6RBQ6 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L19D6RCP7 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L20D6RJB6 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 GNRH1P01148 92 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 EEF2P13639 858 aaKnown RBP23.67■■□□□ 1.38
LINC00654-202ENST00000589201 VCAM1P19320 739 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 HERVK_113P62684 666 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 USP17L24Q0WX57 530 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 ALX1Q15699 326 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 CWC27Q6UX04 472 aaKnown RBP23.67■■□□□ 1.38
LINC00654-202ENST00000589201 ZNF444Q8N0Y2 327 aaPredicted RBP23.67■■□□□ 1.38
LINC00654-202ENST00000589201 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 ZNF287Q9HBT7 754 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 ARHGEF10LQ9HCE6 1279 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 TMX2Q9Y320 296 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 CENPFP49454 3210 aa23.67■■□□□ 1.38
LINC00654-202ENST00000589201 CCDC171Q6TFL3 1326 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 FGAP02671 866 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 HSPD1P10809 573 aaKnown RBP23.66■■□□□ 1.38
LINC00654-202ENST00000589201 ATP2B2Q01814 1243 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 FAM110CQ1W6H9 321 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 KIAA1755Q5JYT7 1200 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 CATSPERGQ6ZRH7 1159 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 DIAPH3Q9NSV4 1193 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 PTCH2Q9Y6C5 1203 aa23.66■■□□□ 1.38
LINC00654-202ENST00000589201 HIP1O00291 1037 aa23.65■■□□□ 1.38
LINC00654-202ENST00000589201 PEX10O60683 326 aa23.65■■□□□ 1.38
LINC00654-202ENST00000589201 SLC3A2P08195 630 aaKnown RBP23.65■■□□□ 1.38
LINC00654-202ENST00000589201 FCGRTP55899 365 aa23.65■■□□□ 1.38
LINC00654-202ENST00000589201 CTDSPL2Q05D32 466 aa23.65■■□□□ 1.38
LINC00654-202ENST00000589201 PDE4BQ07343 736 aa23.65■■□□□ 1.38
LINC00654-202ENST00000589201 RPAP3Q9H6T3 665 aaPredicted RBP23.65■■□□□ 1.38
LINC00654-202ENST00000589201 HOXD10P28358 340 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 POTEEQ6S8J3 1075 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 TXNRD2Q9NNW7 524 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 INCENPQ9NQS7 918 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 RBPJLQ9UBG7 517 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 MORF4L1Q9UBU8 362 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 SRRDQ9UH36 339 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 MGAMO43451 1857 aa23.64■■□□□ 1.37
LINC00654-202ENST00000589201 MFAP1P55081 439 aaKnown RBP23.63■■□□□ 1.37
LINC00654-202ENST00000589201 SPICE1Q8N0Z3 855 aa23.63■■□□□ 1.37
LINC00654-202ENST00000589201 SH2D4AQ9H788 454 aa23.63■■□□□ 1.37
LINC00654-202ENST00000589201 VCPKMTQ9H867 229 aa23.63■■□□□ 1.37
LINC00654-202ENST00000589201 ANAPC4Q9UJX5 808 aa23.63■■□□□ 1.37
LINC00654-202ENST00000589201 PRMT2P55345 433 aa23.62■■□□□ 1.37
LINC00654-202ENST00000589201 FAM47AQ5JRC9 791 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms