RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 MYPNQ86TC9 1320 aa11.55□□□□□ -0.56
APOC1-204ENST00000589078 GSG1L2A8MUP6 293 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 FARP2O94887 1054 aaPredicted RBP11.54□□□□□ -0.56
APOC1-204ENST00000589078 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 SDSP20132 328 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 SBK1Q52WX2 424 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 TATDN1Q6P1N9 297 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 CTR9Q6PD62 1173 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
APOC1-204ENST00000589078 RNF208Q9H0X6 261 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 NAPBQ9H115 298 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 DNAJC18Q9H819 358 aa11.54□□□□□ -0.56
APOC1-204ENST00000589078 A0A1W2PPC1 479 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 MINDY4BA8MYZ0 360 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 GDF11O95390 407 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
APOC1-204ENST00000589078 CYP2D6P10635 497 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
APOC1-204ENST00000589078 GABPAQ06546 454 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
APOC1-204ENST00000589078 ABCB5Q2M3G0 1257 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 FAM227BQ96M60 508 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 BIN2Q9UBW5 565 aaPredicted RBP11.53□□□□□ -0.56
APOC1-204ENST00000589078 ZBTB21Q9ULJ3 1066 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 AFG3L2Q9Y4W6 797 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 ADGRA2Q96PE1 1338 aa11.53□□□□□ -0.56
APOC1-204ENST00000589078 EYSQ5T1H1 3165 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 A0A0D9SFI3 127 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
APOC1-204ENST00000589078 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.57
APOC1-204ENST00000589078 GH2P01242 217 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 HOXD10P28358 340 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 SHMT1P34896 483 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 UBXN2AP68543 259 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 PRKCZQ05513 592 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 RAB3GAP1Q15042 981 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
APOC1-204ENST00000589078 C16orf86Q6ZW13 317 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
APOC1-204ENST00000589078 U2AF1L4Q8WU68 220 aaKnown RBP11.52□□□□□ -0.57
APOC1-204ENST00000589078 RUFY2Q8WXA3 655 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 MKNK2Q9HBH9 465 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 VCANP13611 3396 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 AK9Q5TCS8 1911 aa11.52□□□□□ -0.57
APOC1-204ENST00000589078 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
APOC1-204ENST00000589078 CYP2D7A0A087X1C5 515 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 PDHXO00330 501 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 EVI5O60447 810 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
APOC1-204ENST00000589078 CDK8P49336 464 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 PDE4BQ07343 736 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 SPP2Q13103 211 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 PABPC4Q13310 644 aaKnown RBP eCLIP11.51□□□□□ -0.573e-8■■■■■ 52
APOC1-204ENST00000589078 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
APOC1-204ENST00000589078 GADL1Q6ZQY3 521 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 CCDC129Q6ZRS4 1044 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 TMEM179Q6ZVK1 233 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 DYNLL2Q96FJ2 89 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 PARK7Q99497 189 aaKnown RBP11.51□□□□□ -0.57
APOC1-204ENST00000589078 FEZ1Q99689 392 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
APOC1-204ENST00000589078 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
APOC1-204ENST00000589078 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 USP14P54578 494 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 ALX1Q15699 326 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
APOC1-204ENST00000589078 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
APOC1-204ENST00000589078 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 SLC45A1Q9Y2W3 748 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 RAD50Q92878 1312 aa11.5□□□□□ -0.57
APOC1-204ENST00000589078 SGPL1O95470 568 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 HSPD1P10809 573 aaKnown RBP11.49□□□□□ -0.57
APOC1-204ENST00000589078 HMGCS2P54868 508 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 FCGRTP55899 365 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 BACE1P56817 501 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 PPARAQ07869 468 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 MTMR2Q13614 643 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 USP17L2Q6R6M4 530 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 CASC1Q6TDU7 716 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 ZNF589Q86UQ0 364 aaPredicted RBP11.49□□□□□ -0.57
APOC1-204ENST00000589078 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
APOC1-204ENST00000589078 ZNF444Q8N0Y2 327 aaPredicted RBP11.49□□□□□ -0.57
APOC1-204ENST00000589078 CTNNA3Q9UI47 895 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 GABRQQ9UN88 632 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 AGTPBP1Q9UPW5 1226 aa11.49□□□□□ -0.57
APOC1-204ENST00000589078 ROBO3Q96MS0 1386 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms