RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 FANCBQ8NB91 859 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 DENND2AQ9ULE3 1009 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 MYO5AQ9Y4I1 1855 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 PTPREP23469 700 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 VEGFBP49765 207 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 UBASH3AP57075 661 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 PPARAQ07869 468 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 DIS3L2Q8IYB7 885 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 PHKBQ93100 1093 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 BRIP1Q9BX63 1249 aa16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 SRRTQ9BXP5 876 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 FAM217BQ9NTX9 383 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-223ENST00000588516 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 ECM29Q5VYK3 1845 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 CYP7A1P22680 504 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 NCAPHQ15003 741 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 TTLL6Q8N841 843 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 SMARCE1Q969G3 411 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-223ENST00000588516 RANBP6O60518 1105 aaKnown RBP16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 TPM1P09493 284 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 ERCC5P28715 1186 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 CHRNDQ07001 517 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 PPP4R3BQ5MIZ7 849 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 HELBQ8NG08 1087 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 WBP1LQ9NX94 342 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 ZNF804BA4D1E1 1349 aa16.05■□□□□ 0.16
NEDD4L-223ENST00000588516 BIN1O00499 593 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 ZPR1O75312 459 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 DDAH1O94760 285 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 NTSR2O95665 410 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 POTEJP0CG39 1038 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 TOP1P11387 765 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 TM4SF1P30408 202 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 POSTNQ15063 836 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 CFAP100Q494V2 611 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 RRP12Q5JTH9 1297 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 ZNF592Q92610 1267 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 BSDC1Q9NW68 430 aaPredicted RBP16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 OGFRQ9NZT2 677 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 MROH7-TTC4A0A0A0MT08 1334 aa16.04■□□□□ 0.16
NEDD4L-223ENST00000588516 TRIM75PA6NK02 468 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 NFKBIEO00221 500 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 HSPA8P11142 646 aaKnown RBP16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 KRT2P35908 639 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 VSTM4Q8IW00 320 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 LCORLQ8N3X6 602 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 ZNF397Q8NF99 534 aaPredicted RBP16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 FBXW7Q969H0 707 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 ANKRD2Q9GZV1 360 aa16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 AATFQ9NY61 560 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEDD4L-223ENST00000588516 MYH6P13533 1939 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 ARHGAP6O43182 974 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 CDK11BP21127 795 aaKnown RBP16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 TRAPPC10P48553 1259 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 BCAMP50895 628 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 AIFM3Q96NN9 605 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 GTPBP4Q9BZE4 634 aaKnown RBP16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 FBXO2Q9UK22 296 aaPredicted RBP16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 PCDHA5Q9Y5H7 936 aa16.02■□□□□ 0.16
NEDD4L-223ENST00000588516 PHLPP2Q6ZVD8 1323 aa16.02■□□□□ 0.15
NEDD4L-223ENST00000588516 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.15
NEDD4L-223ENST00000588516 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms