RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 CCDC129Q6ZRS4 1044 aa28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 TMEM179Q6ZVK1 233 aa28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 ACER1Q8TDN7 264 aa28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 ASCC2Q9H1I8 757 aaPredicted RBP28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 EMILIN3Q9NT22 766 aa28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 PTPN22Q9Y2R2 807 aa28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 MINDY4BA8MYZ0 360 aa28.1■■■□□ 2.09
CHAF1A-205ENST00000587580 IFNL3Q8IZI9 196 aa28.1■■■□□ 2.09
CHAF1A-205ENST00000587580 CCDC17Q96LX7 622 aa28.1■■■□□ 2.09
CHAF1A-205ENST00000587580 NACAP1Q9BZK3 213 aa28.1■■■□□ 2.09
CHAF1A-205ENST00000587580 ROBO3Q96MS0 1386 aa28.1■■■□□ 2.09
CHAF1A-205ENST00000587580 USP14P54578 494 aa28.09■■■□□ 2.09
CHAF1A-205ENST00000587580 IRX3P78415 501 aaPredicted RBP28.09■■■□□ 2.09
CHAF1A-205ENST00000587580 KIAA1683Q9H0B3 1180 aa28.09■■■□□ 2.09
CHAF1A-205ENST00000587580 CTGFP29279 349 aa28.08■■■□□ 2.09
CHAF1A-205ENST00000587580 PSMC4P43686 418 aa28.08■■■□□ 2.09
CHAF1A-205ENST00000587580 STK11IPQ8N1F8 1099 aa28.08■■■□□ 2.09
CHAF1A-205ENST00000587580 C12orf42Q96LP6 360 aa28.08■■■□□ 2.09
CHAF1A-205ENST00000587580 HELLSQ9NRZ9 838 aa28.08■■■□□ 2.09
CHAF1A-205ENST00000587580 MGAMO43451 1857 aa28.08■■■□□ 2.09
CHAF1A-205ENST00000587580 HOXA7P31268 230 aaPredicted RBP28.07■■■□□ 2.08
CHAF1A-205ENST00000587580 TICAM2Q86XR7 235 aa28.07■■■□□ 2.08
CHAF1A-205ENST00000587580 ANKRD13CQ8N6S4 541 aa28.07■■■□□ 2.08
CHAF1A-205ENST00000587580 FAM227BQ96M60 508 aa28.07■■■□□ 2.08
CHAF1A-205ENST00000587580 NAPBQ9H115 298 aa28.07■■■□□ 2.08
CHAF1A-205ENST00000587580 A0A0D9SFI3 127 aa28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 GNRH1P01148 92 aa28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 PDE4AP27815 886 aa28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 GCLCP48506 637 aaPredicted RBP28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 ICA1Q05084 483 aa28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 CLEC10AQ8IUN9 316 aa28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 TRIM47Q96LD4 638 aa28.06■■■□□ 2.08
CHAF1A-205ENST00000587580 FMNL1O95466 1100 aaPredicted RBP28.05■■■□□ 2.08
CHAF1A-205ENST00000587580 NMIQ13287 307 aaPredicted RBP28.05■■■□□ 2.08
CHAF1A-205ENST00000587580 FAM110CQ1W6H9 321 aa28.05■■■□□ 2.08
CHAF1A-205ENST00000587580 PTCH2Q9Y6C5 1203 aa28.05■■■□□ 2.08
CHAF1A-205ENST00000587580 A0A1W2PRG0 241 aa28.04■■■□□ 2.08
CHAF1A-205ENST00000587580 VCAM1P19320 739 aa28.04■■■□□ 2.08
CHAF1A-205ENST00000587580 FCGRTP55899 365 aa28.04■■■□□ 2.08
CHAF1A-205ENST00000587580 MKNK2Q9HBH9 465 aa28.04■■■□□ 2.08
CHAF1A-205ENST00000587580 GREB1LQ9C091 1923 aaPredicted RBP28.03■■■□□ 2.08
CHAF1A-205ENST00000587580 FOXP2O15409 715 aa28.03■■■□□ 2.08
CHAF1A-205ENST00000587580 RASA1P20936 1047 aa28.03■■■□□ 2.08
CHAF1A-205ENST00000587580 MCMDC2Q4G0Z9 681 aa28.03■■■□□ 2.08
CHAF1A-205ENST00000587580 P2RX7Q99572 595 aaKnown RBP28.03■■■□□ 2.08
CHAF1A-205ENST00000587580 ARHGEF10LQ9HCE6 1279 aa28.03■■■□□ 2.08
CHAF1A-205ENST00000587580 HERVK_113P62684 666 aa28.02■■■□□ 2.08
CHAF1A-205ENST00000587580 VPS53Q5VIR6 699 aa28.02■■■□□ 2.08
CHAF1A-205ENST00000587580 USP17L15C9J2P7 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L13C9JLJ4 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L11C9JVI0 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L18D6R9N7 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L22D6RA61 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L17D6RBQ6 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L19D6RCP7 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L20D6RJB6 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 SDSP20132 328 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 HOXD10P28358 340 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 PRMT2P55345 433 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 PPARAQ07869 468 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 USP17L24Q0WX57 530 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 SH2D4AQ9H788 454 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 ZNF287Q9HBT7 754 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 SRRDQ9UH36 339 aa28.01■■■□□ 2.07
CHAF1A-205ENST00000587580 MYPNQ86TC9 1320 aa28■■■□□ 2.07
CHAF1A-205ENST00000587580 ZNF589Q86UQ0 364 aaPredicted RBP28■■■□□ 2.07
CHAF1A-205ENST00000587580 SIAH1Q8IUQ4 282 aa28■■■□□ 2.07
CHAF1A-205ENST00000587580 RPAP3Q9H6T3 665 aaPredicted RBP28■■■□□ 2.07
CHAF1A-205ENST00000587580 KANSL2Q9H9L4 492 aa28■■■□□ 2.07
CHAF1A-205ENST00000587580 CCDC171Q6TFL3 1326 aa27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 PRDM1O75626 825 aa27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 SLC3A2P08195 630 aaKnown RBP27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 SOX10P56693 466 aa27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 ATP2B2Q01814 1243 aa27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 CATSPERGQ6ZRH7 1159 aa27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 TMX2Q9Y320 296 aa27.99■■■□□ 2.07
CHAF1A-205ENST00000587580 TNPO2O14787 897 aaKnown RBP27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 EEF2P13639 858 aaKnown RBP27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 PDE4BQ07343 736 aa27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 SLC9C1Q4G0N8 1177 aa27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 TTC22Q5TAA0 569 aa27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 GTF3C2Q8WUA4 911 aaPredicted RBP27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 DIAPH3Q9NSV4 1193 aa27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 MORF4L1Q9UBU8 362 aa27.98■■■□□ 2.07
CHAF1A-205ENST00000587580 PRKCZQ05513 592 aa27.97■■■□□ 2.07
CHAF1A-205ENST00000587580 ZNF444Q8N0Y2 327 aaPredicted RBP27.97■■■□□ 2.07
CHAF1A-205ENST00000587580 VCPKMTQ9H867 229 aa27.97■■■□□ 2.07
CHAF1A-205ENST00000587580 HTTP42858 3142 aa27.97■■■□□ 2.07
CHAF1A-205ENST00000587580 HIP1O00291 1037 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 PEX10O60683 326 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 GSPT1P15170 499 aaKnown RBP27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 KIAA1755Q5JYT7 1200 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 RAET1EQ8TD07 263 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 LPAR1Q92633 364 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 ARMC5Q96C12 935 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 PAGR1Q9BTK6 254 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 TXNRD2Q9NNW7 524 aa27.96■■■□□ 2.07
CHAF1A-205ENST00000587580 HSPD1P10809 573 aaKnown RBP27.95■■■□□ 2.06
CHAF1A-205ENST00000587580 MFAP1P55081 439 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms