RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 IRX3P78415 501 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-207ENST00000587256 USP17L2Q6R6M4 530 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 IFNL3Q8IZI9 196 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 STK11IPQ8N1F8 1099 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 ARHGAP39Q9C0H5 1083 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 ZSWIM8A7E2V4 1837 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 A0A0D9SFI3 127 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 BCRP11274 1271 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 TICAM2Q86XR7 235 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 ACER1Q8TDN7 264 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 CCDC17Q96LX7 622 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
ATG4D-207ENST00000587256 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-207ENST00000587256 PDE4AP27815 886 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 CAP1Q01518 475 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 ICA1Q05084 483 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
ATG4D-207ENST00000587256 CLEC10AQ8IUN9 316 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 KIAA1683Q9H0B3 1180 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 EMILIN3Q9NT22 766 aa17.69■□□□□ 0.42
ATG4D-207ENST00000587256 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 ANKRD13CQ8N6S4 541 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 C12orf42Q96LP6 360 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 SH2D4AQ9H788 454 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 ZNF287Q9HBT7 754 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 ARHGEF10LQ9HCE6 1279 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
ATG4D-207ENST00000587256 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-207ENST00000587256 SLC3A2P08195 630 aaKnown RBP17.67■□□□□ 0.42
ATG4D-207ENST00000587256 VCAM1P19320 739 aa17.67■□□□□ 0.42
ATG4D-207ENST00000587256 PSMC4P43686 418 aa17.67■□□□□ 0.42
ATG4D-207ENST00000587256 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-207ENST00000587256 FCGRTP55899 365 aa17.67■□□□□ 0.42
ATG4D-207ENST00000587256 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
ATG4D-207ENST00000587256 HIP1O00291 1037 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 PRDM1O75626 825 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 GNRH1P01148 92 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 SDSP20132 328 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-207ENST00000587256 PPARAQ07869 468 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 FAM110CQ1W6H9 321 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
ATG4D-207ENST00000587256 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L15C9J2P7 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L13C9JLJ4 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L11C9JVI0 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L18D6R9N7 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L22D6RA61 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L17D6RBQ6 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L19D6RCP7 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L20D6RJB6 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 FOXP2O15409 715 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 RASA1P20936 1047 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
ATG4D-207ENST00000587256 HERVK_113P62684 666 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 PDE4BQ07343 736 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 USP17L24Q0WX57 530 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
ATG4D-207ENST00000587256 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 PTCH2Q9Y6C5 1203 aa17.65■□□□□ 0.42
ATG4D-207ENST00000587256 TNPO2O14787 897 aaKnown RBP17.64■□□□□ 0.41
ATG4D-207ENST00000587256 HOXD10P28358 340 aa17.64■□□□□ 0.41
ATG4D-207ENST00000587256 CTGFP29279 349 aa17.64■□□□□ 0.41
ATG4D-207ENST00000587256 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
ATG4D-207ENST00000587256 GTF3C2Q8WUA4 911 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-207ENST00000587256 P2RX7Q99572 595 aaKnown RBP17.64■□□□□ 0.41
ATG4D-207ENST00000587256 RPAP3Q9H6T3 665 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-207ENST00000587256 MYPNQ86TC9 1320 aa17.64■□□□□ 0.41
ATG4D-207ENST00000587256 GREB1LQ9C091 1923 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-207ENST00000587256 NEFLP07196 543 aa17.63■□□□□ 0.41
ATG4D-207ENST00000587256 EEF2P13639 858 aaKnown RBP17.63■□□□□ 0.41
ATG4D-207ENST00000587256 GSPT1P15170 499 aaKnown RBP17.63■□□□□ 0.41
ATG4D-207ENST00000587256 PRMT2P55345 433 aa17.63■□□□□ 0.41
ATG4D-207ENST00000587256 ZNF444Q8N0Y2 327 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-207ENST00000587256 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
ATG4D-207ENST00000587256 TANGO6Q9C0B7 1094 aa17.63■□□□□ 0.41
ATG4D-207ENST00000587256 SRRDQ9UH36 339 aa17.63■□□□□ 0.41
ATG4D-207ENST00000587256 RAD21O60216 631 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 SOX10P56693 466 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 SLC9C1Q4G0N8 1177 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 SPICE1Q8N0Z3 855 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 LPAR1Q92633 364 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 TMX2Q9Y320 296 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 MGAMO43451 1857 aa17.62■□□□□ 0.41
ATG4D-207ENST00000587256 TSPY3P0CV98 308 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 TSPY8P0CW00 308 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 HSPD1P10809 573 aaKnown RBP17.61■□□□□ 0.41
ATG4D-207ENST00000587256 PRKCZQ05513 592 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 ALX1Q15699 326 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms