RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ACER1Q8TDN7 264 aa21.25■□□□□ 0.99
TPM4-206ENST00000587201 COA7Q96BR5 231 aa21.25■□□□□ 0.99
TPM4-206ENST00000587201 C12orf42Q96LP6 360 aa21.25■□□□□ 0.99
TPM4-206ENST00000587201 KIAA1683Q9H0B3 1180 aa21.25■□□□□ 0.99
TPM4-206ENST00000587201 BAZ2AQ9UIF9 1905 aaKnown RBP21.24■□□□□ 0.99
TPM4-206ENST00000587201 CDK8P49336 464 aa21.24■□□□□ 0.99
TPM4-206ENST00000587201 FLT3LGP49771 235 aa21.24■□□□□ 0.99
TPM4-206ENST00000587201 HERVK_113P62684 666 aa21.24■□□□□ 0.99
TPM4-206ENST00000587201 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
TPM4-206ENST00000587201 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
TPM4-206ENST00000587201 SMIM22K7EJ46 135 aa21.23■□□□□ 0.99
TPM4-206ENST00000587201 EN2P19622 333 aaPredicted RBP21.23■□□□□ 0.99
TPM4-206ENST00000587201 TMEM179Q6ZVK1 233 aa21.23■□□□□ 0.99
TPM4-206ENST00000587201 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
TPM4-206ENST00000587201 MORF4L1Q9UBU8 362 aa21.23■□□□□ 0.99
TPM4-206ENST00000587201 BIN2Q9UBW5 565 aaPredicted RBP21.23■□□□□ 0.99
TPM4-206ENST00000587201 SALL3Q9BXA9 1300 aa21.23■□□□□ 0.99
TPM4-206ENST00000587201 CENPFP49454 3210 aa21.23■□□□□ 0.99
TPM4-206ENST00000587201 USP17L15C9J2P7 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L13C9JLJ4 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L11C9JVI0 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L18D6R9N7 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L22D6RA61 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L17D6RBQ6 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L19D6RCP7 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L20D6RJB6 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 GPAA1O43292 621 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 AKR1B1P15121 316 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 USP17L24Q0WX57 530 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 C16orf86Q6ZW13 317 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 SLAIN1Q8ND83 568 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 EXOC6Q8TAG9 804 aa21.22■□□□□ 0.99
TPM4-206ENST00000587201 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
TPM4-206ENST00000587201 GSG1L2A8MUP6 293 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 M0R2C6 588 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 ADCY3O60266 1144 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 VCAM1P19320 739 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 UBXN2AP68543 259 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 MTFR1Q15390 333 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 GIMAP6Q6P9H5 292 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 GPRC5AQ8NFJ5 357 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 GTF3C2Q8WUA4 911 aaPredicted RBP21.21■□□□□ 0.99
TPM4-206ENST00000587201 CCDC17Q96LX7 622 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 TXNRD2Q9NNW7 524 aa21.21■□□□□ 0.99
TPM4-206ENST00000587201 A0A1W2PRG0 241 aa21.2■□□□□ 0.98
TPM4-206ENST00000587201 PEX10O60683 326 aa21.2■□□□□ 0.98
TPM4-206ENST00000587201 GNAT2P19087 354 aa21.2■□□□□ 0.98
TPM4-206ENST00000587201 CATSPERGQ6ZRH7 1159 aa21.2■□□□□ 0.98
TPM4-206ENST00000587201 PAGR1Q9BTK6 254 aa21.2■□□□□ 0.98
TPM4-206ENST00000587201 RBPJLQ9UBG7 517 aa21.2■□□□□ 0.98
TPM4-206ENST00000587201 SUPT16HQ9Y5B9 1047 aaKnown RBP21.2■□□□□ 0.98
TPM4-206ENST00000587201 RBBP6Q7Z6E9 1792 aaKnown RBP21.2■□□□□ 0.98
TPM4-206ENST00000587201 KIAA0100Q14667 2235 aaKnown RBP21.19■□□□□ 0.98
TPM4-206ENST00000587201 MINDY4BA8MYZ0 360 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 APPP05067 770 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 TDO2P48775 406 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 ICA1Q05084 483 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 IRF5Q13568 498 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 SBK1Q52WX2 424 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 SEC62Q99442 399 aaKnown RBP21.19■□□□□ 0.98
TPM4-206ENST00000587201 RPAP3Q9H6T3 665 aaPredicted RBP21.19■□□□□ 0.98
TPM4-206ENST00000587201 ARHGEF10LQ9HCE6 1279 aa21.19■□□□□ 0.98
TPM4-206ENST00000587201 MYH8P13535 1937 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 ELNP15502 786 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 PDE1AP54750 535 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 ERVK-9P63128 1117 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 ERVK-24P63145 666 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 CLEC10AQ8IUN9 316 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 CCAR1Q8IX12 1150 aaKnown RBP21.18■□□□□ 0.98
TPM4-206ENST00000587201 STK11IPQ8N1F8 1099 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 PXYLP1Q8TE99 480 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 LNPKQ9C0E8 428 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 STAP2Q9UGK3 403 aa21.18■□□□□ 0.98
TPM4-206ENST00000587201 PATL2C9JE40 543 aaKnown RBP21.17■□□□□ 0.98
TPM4-206ENST00000587201 Q3C1V9 767 aa21.17■□□□□ 0.98
TPM4-206ENST00000587201 ZMYM1Q5SVZ6 1142 aa21.17■□□□□ 0.98
TPM4-206ENST00000587201 MKNK2Q9HBH9 465 aa21.17■□□□□ 0.98
TPM4-206ENST00000587201 EPB41L4AQ9HCS5 686 aaPredicted RBP21.17■□□□□ 0.98
TPM4-206ENST00000587201 CCL5P13501 91 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 SMC5Q8IY18 1101 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 IFNL3Q8IZI9 196 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 EVI5LQ96CN4 794 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 NACAP1Q9BZK3 213 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 RNF208Q9H0X6 261 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 SH2D4AQ9H788 454 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 GJD2Q9UKL4 321 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 TMX2Q9Y320 296 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 RABGAP1Q9Y3P9 1069 aa21.16■□□□□ 0.98
TPM4-206ENST00000587201 BRCA2P51587 3418 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 IGHDP01880 384 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 INHAP05111 366 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 MAPK4P31152 587 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 ATP2B2Q01814 1243 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 TANGO6Q9C0B7 1094 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 KANSL2Q9H9L4 492 aa21.15■□□□□ 0.98
TPM4-206ENST00000587201 CWC22Q9HCG8 908 aaKnown RBP21.15■□□□□ 0.98
TPM4-206ENST00000587201 DOCK3Q8IZD9 2030 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms