RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 GH2P01242 217 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 COL6A1P12109 1028 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 HERVK_113P62684 666 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 IRX3P78415 501 aaPredicted RBP13.18□□□□□ -0.3
PGAP3-209ENST00000584620 TATDN1Q6P1N9 297 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 TRIB2Q92519 343 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 RIOK1Q9BRS2 568 aaKnown RBP13.18□□□□□ -0.3
PGAP3-209ENST00000584620 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 RBPJLQ9UBG7 517 aa13.18□□□□□ -0.3
PGAP3-209ENST00000584620 FOSL2P15408 326 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 CYP2B6P20813 491 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 Q3C1V9 767 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 TRIM34Q9BYJ4 488 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
PGAP3-209ENST00000584620 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
PGAP3-209ENST00000584620 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
PGAP3-209ENST00000584620 USP5P45974 858 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 PLCD1P51178 756 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 EVX2Q03828 476 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 MAP3K12Q12852 859 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 SHHQ15465 462 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 USP6NLQ92738 828 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 EHD4Q9H223 541 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 PORCNQ9H237 461 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
PGAP3-209ENST00000584620 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 SHMT1P34896 483 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 ERVK-24P63145 666 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 MAP3K21Q5TCX8 1036 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
PGAP3-209ENST00000584620 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
PGAP3-209ENST00000584620 ATAD5Q96QE3 1844 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 TCRBV5S4A2TA0A5A2 114 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 CNMDO75829 334 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 PDE6AP16499 860 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 CCND3P30281 292 aaPredicted RBP13.14□□□□□ -0.31
PGAP3-209ENST00000584620 GABPAQ06546 454 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
PGAP3-209ENST00000584620 CERKLQ49MI3 558 aaPredicted RBP13.14□□□□□ -0.31
PGAP3-209ENST00000584620 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 C9orf50Q5SZB4 431 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 MORN1Q5T089 497 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 SENP6Q9GZR1 1112 aaPredicted RBP13.14□□□□□ -0.31
PGAP3-209ENST00000584620 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
PGAP3-209ENST00000584620 MYO5AQ9Y4I1 1855 aaKnown RBP13.14□□□□□ -0.31
PGAP3-209ENST00000584620 PLXNB2O15031 1838 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 MAGEB6P1A0A0J9YX57 407 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 MAPK4P31152 587 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 ATN1P54259 1190 aaPredicted RBP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 LHX8Q68G74 356 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 KIF1BPQ96EK5 621 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
PGAP3-209ENST00000584620 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 PAGR1Q9BTK6 254 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 KIAA1683Q9H0B3 1180 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
PGAP3-209ENST00000584620 CDK5RAP2Q96SN8 1893 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 APBB1O00213 710 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 GOLIM4O00461 696 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 VCAM1P19320 739 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
PGAP3-209ENST00000584620 USP17L24Q0WX57 530 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
PGAP3-209ENST00000584620 CCL14Q16627 93 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 CATSPERGQ6ZRH7 1159 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
PGAP3-209ENST00000584620 GTF3C2Q8WUA4 911 aaPredicted RBP13.12□□□□□ -0.31
PGAP3-209ENST00000584620 FEZ1Q99689 392 aa13.12□□□□□ -0.31
PGAP3-209ENST00000584620 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms