RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 GPR75-ASB3A0A0A6YYF3 556 aa21.46■■□□□ 1.03
SNX11-212ENST00000583320 TRIM6-TRIM34B2RNG4 842 aa21.46■■□□□ 1.03
SNX11-212ENST00000583320 CAP2P40123 477 aa21.46■■□□□ 1.03
SNX11-212ENST00000583320 MECOMQ03112 1051 aa21.46■■□□□ 1.03
SNX11-212ENST00000583320 PABPC4Q13310 644 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNX11-212ENST00000583320 FAM109BQ6ICB4 259 aaPredicted RBP21.46■■□□□ 1.03
SNX11-212ENST00000583320 ZGPATQ8N5A5 531 aaKnown RBP21.46■■□□□ 1.03
SNX11-212ENST00000583320 EVI5LQ96CN4 794 aa21.46■■□□□ 1.03
SNX11-212ENST00000583320 P2RX7Q99572 595 aaKnown RBP21.46■■□□□ 1.03
SNX11-212ENST00000583320 ZBTB22O15209 634 aa21.45■■□□□ 1.02
SNX11-212ENST00000583320 JAG1P78504 1218 aa21.45■■□□□ 1.02
SNX11-212ENST00000583320 SHROOM1Q2M3G4 852 aaPredicted RBP21.45■■□□□ 1.02
SNX11-212ENST00000583320 POTEEQ6S8J3 1075 aa21.45■■□□□ 1.02
SNX11-212ENST00000583320 TBC1D9Q6ZT07 1266 aa21.45■■□□□ 1.02
SNX11-212ENST00000583320 USP6NLQ92738 828 aa21.45■■□□□ 1.02
SNX11-212ENST00000583320 HAUS7Q99871 368 aa21.45■■□□□ 1.02
SNX11-212ENST00000583320 LTBP2Q14767 1821 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 USP17L5A8MUK1 530 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 XRCC5P13010 732 aaKnown RBP21.44■■□□□ 1.02
SNX11-212ENST00000583320 ZKSCAN1P17029 563 aaPredicted RBP21.44■■□□□ 1.02
SNX11-212ENST00000583320 MTMR2Q13614 643 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 GORABQ5T7V8 394 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 SOCS4Q8WXH5 440 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 NUDT12Q9BQG2 462 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 PORCNQ9H237 461 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 BOLA2Q9H3K6 86 aa21.44■■□□□ 1.02
SNX11-212ENST00000583320 PDS5AQ29RF7 1337 aaKnown RBP21.44■■□□□ 1.02
SNX11-212ENST00000583320 NPM3O75607 178 aaKnown RBP21.43■■□□□ 1.02
SNX11-212ENST00000583320 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
SNX11-212ENST00000583320 SLF2Q8IX21 1173 aa21.43■■□□□ 1.02
SNX11-212ENST00000583320 RILPL2Q969X0 211 aa21.43■■□□□ 1.02
SNX11-212ENST00000583320 UQCRFS1P1P0C7P4 283 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 HERVK_113P62684 666 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 Q3C1V9 767 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 TTC39AQ5SRH9 613 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 PI16Q6UXB8 463 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 TBC1D2Q9BYX2 928 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 RBPJLQ9UBG7 517 aa21.42■■□□□ 1.02
SNX11-212ENST00000583320 HIP1O00291 1037 aa21.41■■□□□ 1.02
SNX11-212ENST00000583320 MORN1Q5T089 497 aa21.41■■□□□ 1.02
SNX11-212ENST00000583320 GPRC5AQ8NFJ5 357 aa21.41■■□□□ 1.02
SNX11-212ENST00000583320 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
SNX11-212ENST00000583320 CHMLP26374 656 aa21.4■■□□□ 1.02
SNX11-212ENST00000583320 ARID4AP29374 1257 aaPredicted RBP21.4■■□□□ 1.02
SNX11-212ENST00000583320 HOXA7P31268 230 aaPredicted RBP21.4■■□□□ 1.02
SNX11-212ENST00000583320 SPTY2D1Q68D10 685 aaPredicted RBP21.4■■□□□ 1.02
SNX11-212ENST00000583320 GPR142Q7Z601 462 aa21.4■■□□□ 1.02
SNX11-212ENST00000583320 CDX2Q99626 313 aaPredicted RBP21.4■■□□□ 1.02
SNX11-212ENST00000583320 WDR18Q9BV38 432 aa21.4■■□□□ 1.02
SNX11-212ENST00000583320 BACE1P56817 501 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 ZNF697Q5TEC3 545 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 ERICH6Q7L0X2 663 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 APBA2Q99767 749 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 DNAJC18Q9H819 358 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 AS3MTQ9HBK9 375 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 FLRT1Q9NZU1 646 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
SNX11-212ENST00000583320 MUC3AQ02505 3323 aa21.39■■□□□ 1.01
SNX11-212ENST00000583320 SEC24BO95487 1268 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 MAP4K4O95819 1239 aaPredicted RBP21.38■■□□□ 1.01
SNX11-212ENST00000583320 MAPK4P31152 587 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 RGS2P41220 211 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 ATN1P54259 1190 aaPredicted RBP21.38■■□□□ 1.01
SNX11-212ENST00000583320 ERVK-9P63128 1117 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 ERVK-24P63145 666 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 TRMT44Q8IYL2 757 aaKnown RBP21.38■■□□□ 1.01
SNX11-212ENST00000583320 NSUN4Q96CB9 384 aaKnown RBP21.38■■□□□ 1.01
SNX11-212ENST00000583320 PAGR1Q9BTK6 254 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 SENP6Q9GZR1 1112 aaPredicted RBP21.38■■□□□ 1.01
SNX11-212ENST00000583320 HMG20BQ9P0W2 317 aa21.38■■□□□ 1.01
SNX11-212ENST00000583320 MAFAQ8NHW3 353 aaPredicted RBP21.37■■□□□ 1.01
SNX11-212ENST00000583320 SH3RF3Q8TEJ3 882 aaPredicted RBP21.37■■□□□ 1.01
SNX11-212ENST00000583320 LBHD1Q9BQE6 289 aaPredicted RBP21.37■■□□□ 1.01
SNX11-212ENST00000583320 PRDM6Q9NQX0 595 aa21.37■■□□□ 1.01
SNX11-212ENST00000583320 PAG1Q9NWQ8 432 aa21.37■■□□□ 1.01
SNX11-212ENST00000583320 TMOD4Q9NZQ9 345 aa21.37■■□□□ 1.01
SNX11-212ENST00000583320 C9orf50Q5SZB4 431 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 PLEKHH3Q7Z736 793 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 TEX11Q8IYF3 940 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 RUFY2Q8WXA3 655 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 HERC5Q9UII4 1024 aaKnown RBP21.36■■□□□ 1.01
SNX11-212ENST00000583320 NDUFB9Q9Y6M9 179 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 CDK5RAP2Q96SN8 1893 aa21.36■■□□□ 1.01
SNX11-212ENST00000583320 EPB41L2O43491 1005 aaKnown RBP21.35■■□□□ 1.01
SNX11-212ENST00000583320 REC8O95072 547 aa21.35■■□□□ 1.01
SNX11-212ENST00000583320 GDF11O95390 407 aa21.35■■□□□ 1.01
SNX11-212ENST00000583320 DNAJC2Q99543 621 aaKnown RBP21.35■■□□□ 1.01
SNX11-212ENST00000583320 ESYT1Q9BSJ8 1104 aa21.35■■□□□ 1.01
SNX11-212ENST00000583320 FSD1Q9BTV5 496 aa21.35■■□□□ 1.01
SNX11-212ENST00000583320 CNMDO75829 334 aa21.34■■□□□ 1.01
SNX11-212ENST00000583320 RTP1P59025 263 aa21.34■■□□□ 1.01
SNX11-212ENST00000583320 MAP2K5Q13163 448 aa21.34■■□□□ 1.01
SNX11-212ENST00000583320 TTF1Q15361 905 aaPredicted RBP21.34■■□□□ 1.01
SNX11-212ENST00000583320 SHHQ15465 462 aa21.34■■□□□ 1.01
SNX11-212ENST00000583320 LRRFIP1Q32MZ4 808 aaKnown RBP21.34■■□□□ 1.01
SNX11-212ENST00000583320 MYLIPQ8WY64 445 aa21.34■■□□□ 1.01
SNX11-212ENST00000583320 TTYH1Q9H313 450 aaPredicted RBP21.34■■□□□ 1.01
SNX11-212ENST00000583320 SEMA6BQ9H3T3 888 aa21.34■■□□□ 1.01
SNX11-212ENST00000583320 DIAPH3Q9NSV4 1193 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms