RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NOL9Q5SY16 702 aaKnown RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 LDLRAD1Q5T700 205 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 Q6ZUG5 572 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 CCDC84Q86UT8 332 aaPredicted RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 SCYL3Q8IZE3 742 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 ANKS1AQ92625 1134 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 TMEM87BQ96K49 555 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 MTA3Q9BTC8 594 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 AGXT2Q9BYV1 514 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 GBA2Q9HCG7 927 aaPredicted RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 GINM1Q9NU53 330 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 MTMR4Q9NYA4 1195 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 TNKSO95271 1327 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
RFFL-210ENST00000582308 AK2P54819 239 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 FSTL1Q12841 308 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 VGLL4Q14135 290 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 RAB3GAP1Q15042 981 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 CLMNQ96JQ2 1002 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
RFFL-210ENST00000582308 KANSL2Q9H9L4 492 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 SNCAIPQ9Y6H5 919 aa11.21□□□□□ -0.61
RFFL-210ENST00000582308 BAZ2BQ9UIF8 2168 aaKnown RBP11.21□□□□□ -0.62
RFFL-210ENST00000582308 EEF2P13639 858 aaKnown RBP11.2□□□□□ -0.62
RFFL-210ENST00000582308 PTPRAP18433 802 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 LIFRP42702 1097 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 FKBP1BP68106 108 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 WTAPQ15007 396 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 SART3Q15020 963 aaKnown RBP11.2□□□□□ -0.62
RFFL-210ENST00000582308 CCDC178Q5BJE1 867 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 DGKHQ86XP1 1220 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 ACER1Q8TDN7 264 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 BRF1Q92994 677 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 NYAP2Q9P242 653 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 CSADQ9Y600 493 aa11.2□□□□□ -0.62
RFFL-210ENST00000582308 A0A1W2PRG0 241 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 ERICH2A1L162 156 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 USP17L5A8MUK1 530 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 TTLL1O95922 423 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 FGD1P98174 961 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 ATP2B2Q01814 1243 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 ICA1Q05084 483 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 IFIT1BQ5T764 474 aaKnown RBP11.19□□□□□ -0.62
RFFL-210ENST00000582308 SGMS1Q86VZ5 419 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 MKL1Q969V6 931 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 WDR18Q9BV38 432 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
RFFL-210ENST00000582308 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
RFFL-210ENST00000582308 ST18O60284 1047 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
RFFL-210ENST00000582308 ECE1P42892 770 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 EVCP57679 992 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 NFXL1Q6ZNB6 911 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
RFFL-210ENST00000582308 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
RFFL-210ENST00000582308 IL27Q8NEV9 243 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 TPCN1Q9ULQ1 816 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
RFFL-210ENST00000582308 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
RFFL-210ENST00000582308 MYH6P13533 1939 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 KLF18A0A0U1RQI7 1052 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 CCDC69A6NI79 296 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 GJA5P36382 358 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 HUNKP57058 714 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 SPP2Q13103 211 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 KIAA1755Q5JYT7 1200 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 APOA5Q6Q788 366 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 ERO1BQ86YB8 467 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 ZNF654Q8IZM8 581 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 ZNF280CQ8ND82 737 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 SNX21Q969T3 373 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 KAT14Q9H8E8 782 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 ARHGEF10LQ9HCE6 1279 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 LIMCH1Q9UPQ0 1083 aa11.17□□□□□ -0.62
RFFL-210ENST00000582308 HPS5Q9UPZ3 1129 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms