RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 PABPC4Q13310 644 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBB-208ENST00000578706 LRRC41Q15345 812 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 TWISTNBQ3B726 338 aaPredicted RBP7.79□□□□□ -1.16
UBB-208ENST00000578706 MFSD14CQ5VZR4 134 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 KRT40Q6A162 431 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 B4GALNT3Q6L9W6 998 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 CCDC129Q6ZRS4 1044 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 VGLL2Q8N8G2 317 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 EDC3Q96F86 508 aaKnown RBP7.79□□□□□ -1.16
UBB-208ENST00000578706 IDI2Q9BXS1 227 aa7.79□□□□□ -1.16
UBB-208ENST00000578706 TSPYL2Q9H2G4 693 aaPredicted RBP7.79□□□□□ -1.16
UBB-208ENST00000578706 MROH5Q6ZUA9 1318 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 PQBP1O60828 265 aaKnown RBP7.78□□□□□ -1.16
UBB-208ENST00000578706 ENTPD3O75355 529 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
UBB-208ENST00000578706 JAG1P78504 1218 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 MTMR2Q13614 643 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 FAM47AQ5JRC9 791 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 WDR63Q8IWG1 891 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 ARRDC4Q8NCT1 418 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 HERVK_113Q902F9 699 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 TSR2Q969E8 191 aaKnown RBP7.78□□□□□ -1.16
UBB-208ENST00000578706 C9orf78Q9NZ63 289 aaPredicted RBP7.78□□□□□ -1.16
UBB-208ENST00000578706 TBX21Q9UL17 535 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 PHF24Q9UPV7 400 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 MTCH2Q9Y6C9 303 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 COL4A4P53420 1690 aaPredicted RBP7.78□□□□□ -1.16
UBB-208ENST00000578706 CACNA1HO95180 2353 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 MYO15AQ9UKN7 3530 aa7.78□□□□□ -1.16
UBB-208ENST00000578706 EPOPA6NHQ4 379 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 GRM8O00222 908 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 RFXAPO00287 272 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 ACRP10323 421 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 MYOGP15173 224 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 POU3F3P20264 500 aaPredicted RBP7.77□□□□□ -1.17
UBB-208ENST00000578706 GRB14Q14449 540 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 SKIV2LQ15477 1246 aaKnown RBP7.77□□□□□ -1.17
UBB-208ENST00000578706 SHROOM1Q2M3G4 852 aaPredicted RBP7.77□□□□□ -1.17
UBB-208ENST00000578706 BEND3Q5T5X7 828 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 WWC1Q8IX03 1113 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 UIMC1Q96RL1 719 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 PAGR1Q9BTK6 254 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 TMEM39AQ9NV64 488 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 GAKO14976 1311 aa7.77□□□□□ -1.17
UBB-208ENST00000578706 BAHCC1Q9P281 2608 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 SLC15A5A6NIM6 579 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 SEPT4O43236 478 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 ST18O60284 1047 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 TBC1D12O60347 775 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 PDE8BO95263 885 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 TIMP1P01033 207 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 MYCNP04198 464 aaPredicted RBP7.76□□□□□ -1.17
UBB-208ENST00000578706 CSF2RAP15509 400 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 PTPREP23469 700 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 RABGGTBP53611 331 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 FOXK2Q01167 660 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 RAB30Q15771 203 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 LRRC24Q50LG9 513 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 METTL24Q5JXM2 366 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 MFSD5Q6N075 450 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 ZNF365Q70YC5 407 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 ANKRD33Q7Z3H0 272 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 ZSCAN29Q8IWY8 852 aaPredicted RBP7.76□□□□□ -1.17
UBB-208ENST00000578706 SLC44A5Q8NCS7 719 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 EXOC6Q8TAG9 804 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 WDR66Q8TBY9 1149 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 KAZALD1Q96I82 304 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 OSBPL5Q9H0X9 879 aaPredicted RBP7.76□□□□□ -1.17
UBB-208ENST00000578706 KCNH6Q9H252 994 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 SLC28A3Q9HAS3 691 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 MSRAQ9UJ68 235 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 ZFHX4Q86UP3 3567 aa7.76□□□□□ -1.17
UBB-208ENST00000578706 A0A1W2PQ45 241 aaPredicted RBP7.75□□□□□ -1.17
UBB-208ENST00000578706 A0A1W2PQY0 241 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 USP17L5A8MUK1 530 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 F6X3S4 739 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 ATXN8OSP0DMR3 200 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 FGFR2P21802 821 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 CAP2P40123 477 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 BACE1P56817 501 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 ATP2B2Q01814 1243 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 PRAMEF19Q5SWL8 479 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 TOX2Q96NM4 488 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 COG5Q9UP83 839 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 PTPRZ1P23471 2315 aaPredicted RBP7.75□□□□□ -1.17
UBB-208ENST00000578706 RIF1Q5UIP0 2472 aaKnown RBP7.75□□□□□ -1.17
UBB-208ENST00000578706 KIF16BQ96L93 1317 aa7.75□□□□□ -1.17
UBB-208ENST00000578706 TECTAO75443 2155 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 WDR87Q6ZQQ6 2873 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 CACNA1FO60840 1977 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 IFIT1P09914 478 aaKnown RBP7.74□□□□□ -1.17
UBB-208ENST00000578706 PPIGQ13427 754 aaKnown RBP eCLIP7.74□□□□□ -1.17
UBB-208ENST00000578706 PICALMQ13492 652 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 PPP2R2DQ66LE6 453 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 FAM178BQ8IXR5 827 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 GJD3Q8N144 294 aa7.74□□□□□ -1.17
UBB-208ENST00000578706 PRSS33Q8NF86 280 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms