RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 IFIT3O14879 490 aaKnown RBP14.29□□□□□ -0.12
IFT20-207ENST00000578547 PTPRAP18433 802 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 RPS6KB1P23443 525 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 GUCY1A2P33402 732 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 ZNF157P51786 506 aaPredicted RBP14.29□□□□□ -0.12
IFT20-207ENST00000578547 ANTXR2P58335 489 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 FGD1P98174 961 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 ICA1Q05084 483 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 SART3Q15020 963 aaKnown RBP14.29□□□□□ -0.12
IFT20-207ENST00000578547 CEP95Q96GE4 821 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 TNKSO95271 1327 aa14.29□□□□□ -0.12
IFT20-207ENST00000578547 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
IFT20-207ENST00000578547 ERICH2A1L162 156 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 GJA5P36382 358 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 NT5C2P49902 561 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 TMEM67Q5HYA8 995 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 CYP4F22Q6NT55 531 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 RUFY3Q7L099 469 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
IFT20-207ENST00000578547 OTUD5Q96G74 571 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 ZSCAN10Q96SZ4 725 aaPredicted RBP14.28□□□□□ -0.12
IFT20-207ENST00000578547 KIF2CQ99661 725 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 TM6SF1Q9BZW5 370 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 KANSL2Q9H9L4 492 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 ZSWIM6Q9HCJ5 1215 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 IL17RBQ9NRM6 502 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
IFT20-207ENST00000578547 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 USP17L5A8MUK1 530 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
IFT20-207ENST00000578547 ERO1BQ86YB8 467 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 ENAHQ8N8S7 591 aaPredicted RBP14.27□□□□□ -0.13
IFT20-207ENST00000578547 OPTNQ96CV9 577 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 IL17RAQ96F46 866 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 FEZ1Q99689 392 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
IFT20-207ENST00000578547 GINM1Q9NU53 330 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 CLIP2Q9UDT6 1046 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 ZHX2Q9Y6X8 837 aa14.27□□□□□ -0.13
IFT20-207ENST00000578547 SPDYE5A6NIY4 337 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 TRIM75PA6NK02 468 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 FAM155AB1AL88 458 aaPredicted RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 SH2B2O14492 632 aaPredicted RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 RAD21O60216 631 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 TTLL1O95922 423 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 SLC10A3P09131 477 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 EEF2P13639 858 aaKnown RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 NEK4P51957 841 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 EXOSC10Q01780 885 aaKnown RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 PPATQ06203 517 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 GRM1Q13255 1194 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 WTAPQ15007 396 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 RABEP1Q15276 862 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 SPRYD7Q5W111 196 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 NFXL1Q6ZNB6 911 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
IFT20-207ENST00000578547 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 CCDC102AQ96A19 550 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 WNK4Q96J92 1243 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 CAPNS2Q96L46 248 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 AS3MTQ9HBK9 375 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 PDRG1Q9NUG6 133 aa14.26□□□□□ -0.13
IFT20-207ENST00000578547 WDR19Q8NEZ3 1342 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 ECE1P42892 770 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 VEGFBP49765 207 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 SPP2Q13103 211 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
IFT20-207ENST00000578547 Q6ZUG5 572 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
IFT20-207ENST00000578547 SIAH1Q8IUQ4 282 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 TMEM87BQ96K49 555 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 ZIC5Q96T25 663 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 KAT14Q9H8E8 782 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 SENP2Q9HC62 589 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
IFT20-207ENST00000578547 MTMR7Q9Y216 660 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 AFG3L2Q9Y4W6 797 aa14.25□□□□□ -0.13
IFT20-207ENST00000578547 MYH4Q9Y623 1939 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 A0A1W2PRG0 241 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 IRF6O14896 467 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 AOC2O75106 756 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 PPIL2Q13356 520 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 MTMR2Q13614 643 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 SEC23AQ15436 765 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 RCSD1Q6JBY9 416 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 ZNF280CQ8ND82 737 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 IGDCC4Q8TDY8 1250 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 BRF1Q92994 677 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 TMEM47Q9BQJ4 181 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms