RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MYH8P13535 1937 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 NID2Q14112 1375 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 ZBTB43O43298 467 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 LARGE1O95461 756 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 EPHX2P34913 555 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 PNMA8AQ86V59 439 aaPredicted RBP15.71■□□□□ 0.11
SRSF1-202ENST00000578430 DCPSQ96C86 337 aaKnown RBP15.71■□□□□ 0.11
SRSF1-202ENST00000578430 TEPSINQ96N21 525 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 BRPF3Q9ULD4 1205 aa15.71■□□□□ 0.11
SRSF1-202ENST00000578430 ASTN2O75129 1339 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-202ENST00000578430 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 DDAH1O94760 285 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 FSTL1Q12841 308 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 KLRG1Q96E93 195 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 TAF1DQ9H5J8 278 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-202ENST00000578430 IL17RBQ9NRM6 502 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 NAP1L2Q9ULW6 460 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-202ENST00000578430 PCNTO95613 3336 aa15.7■□□□□ 0.1
SRSF1-202ENST00000578430 PDIA4P13667 645 aaKnown RBP15.69■□□□□ 0.1
SRSF1-202ENST00000578430 AKR1B1P15121 316 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
SRSF1-202ENST00000578430 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 RCSD1Q6JBY9 416 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
SRSF1-202ENST00000578430 ZNF654Q8IZM8 581 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 KAT14Q9H8E8 782 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 CABP5Q9NP86 173 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 CIZ1Q9ULV3 898 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-202ENST00000578430 HPS5Q9UPZ3 1129 aa15.69■□□□□ 0.1
SRSF1-202ENST00000578430 NMT2O60551 498 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 TTLL1O95922 423 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 TOP1P11387 765 aaKnown RBP15.68■□□□□ 0.1
SRSF1-202ENST00000578430 SCRN1Q12765 414 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 STK3Q13188 491 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 SULF1Q8IWU6 871 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 NECAB1Q8N987 351 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 CEP95Q96GE4 821 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.68■□□□□ 0.1
SRSF1-202ENST00000578430 KANSL2Q9H9L4 492 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 SENP2Q9HC62 589 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 SYNPO2Q9UMS6 1093 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 SMC3Q9UQE7 1217 aa15.68■□□□□ 0.1
SRSF1-202ENST00000578430 GREB1LQ9C091 1923 aaPredicted RBP15.68■□□□□ 0.1
SRSF1-202ENST00000578430 FAM196BA6NMK8 535 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 GOLGA8AA7E2F4 631 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 MPHOSPH10O00566 681 aaKnown RBP15.67■□□□□ 0.1
SRSF1-202ENST00000578430 CDKL5O76039 1030 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
SRSF1-202ENST00000578430 ST3GAL1Q11201 340 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 RBM28Q9NW13 759 aaKnown RBP15.67■□□□□ 0.1
SRSF1-202ENST00000578430 NYAP2Q9P242 653 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 STX8Q9UNK0 236 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 KIF3AQ9Y496 699 aa15.67■□□□□ 0.1
SRSF1-202ENST00000578430 POTECB2RU33 542 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 CPLX1O14810 134 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
SRSF1-202ENST00000578430 KIF5BP33176 963 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 DDIT3P35638 169 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 CCT2P78371 535 aaKnown RBP15.66■□□□□ 0.1
SRSF1-202ENST00000578430 TROAPQ12815 778 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 RTN1Q16799 776 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 MICU3Q86XE3 530 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 JMYQ8N9B5 988 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 FANCBQ8NB91 859 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 SMARCC2Q8TAQ2 1214 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 MKL1Q969V6 931 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 TMEM47Q9BQJ4 181 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 ZNF341Q9BYN7 854 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 CHMP5Q9NZZ3 219 aa15.66■□□□□ 0.1
SRSF1-202ENST00000578430 ASNSP08243 561 aa15.65■□□□□ 0.1
SRSF1-202ENST00000578430 CAP2P40123 477 aa15.65■□□□□ 0.1
SRSF1-202ENST00000578430 GNAQP50148 359 aa15.65■□□□□ 0.1
SRSF1-202ENST00000578430 NBPF12Q5TAG4 269 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-202ENST00000578430 COL13A1Q5TAT6 717 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-202ENST00000578430 CDAN1Q8IWY9 1227 aa15.65■□□□□ 0.1
SRSF1-202ENST00000578430 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-202ENST00000578430 ZNF112Q9UJU3 913 aa15.65■□□□□ 0.1
SRSF1-202ENST00000578430 PHF20L1A8MW92 1017 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 CTNND1O60716 968 aaKnown RBP15.64■□□□□ 0.09
SRSF1-202ENST00000578430 GH2P01242 217 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 PDCP20941 246 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 MIGA2Q7L4E1 593 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 KRT26Q7Z3Y9 468 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 SMC1BQ8NDV3 1235 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 NSUN7Q8NE18 718 aaKnown RBP15.64■□□□□ 0.09
SRSF1-202ENST00000578430 NUP133Q8WUM0 1156 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 NCOA5Q9HCD5 579 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms